Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0592 ACATCCACGATGGTTGGGTGAGTTTTGGTGCTACTTAAAGAGGATAGGGCGCACATCTGAATTCTTAATATATGGACAGGGACAACAGCGAAATGCATTTATTGAGGCTGTCCGATTGTTAGAAACCGGAAAAAGAGCTTATAATGATGAAGAAGCAGCTGCTAGAGCTTATGATTTAGCTGTACTCAAATTCAGGGGAACATCAACATTCACCAATTTCCCCAGCAAAAAGCAAGCACAGACCCTCAAACCTTTACAGCTTCTAAACCCATCATCCAGACCACAGGAACTGCTGAGAGTCAATGGTCAACGTCATAAGTCAACGCTTAACACCGAAAAGTCAACAGTCAATGCGAAAATTGATGCCAGGAAGTCAACAGTCAACTGCCATCGGCTGTCAGTCAACATCGGTCAATGGTGGTCAACGGCCAATATTTTTCTGTCTCCATCTCCACCACCAAATATGATACATTGA 475 0.4337 HPRWLGEFWCYLKRIGRTSEFLIYGQGQQRNAFIEAVRLLETGKRAYNDEEAAARAYDLAVLKFRGTSTFTNFPSKKQAQTLKPLQLLNPSSRPQELLRVNGQRHKSTLNTEKSTVNAKIDARKSTVNCHRLSVNIGQWWSTANIFLSPSPPPNMIH* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0592 157 ProSiteProfiles AP2/ERF domain profile. 1 74 IPR001471 GO:0003700|GO:0006355
Dod05g0592 157 SMART rav1_2 22 80 IPR001471 GO:0003700|GO:0006355
Dod05g0592 157 Gene3D AP2/ERF domain 30 76 IPR036955 GO:0003700|GO:0006355
Dod05g0592 157 SUPERFAMILY DNA-binding domain 46 75 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0592 Dod-Chr5 8647151 8652722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0592 46 88 AP2-EREBP Transcription Factor Family AT5G17430 46.512 7.97e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0592 - - adu:107466470 59.6918