Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0578 ATGAAGAAAACACAAGGCCCCTCCAGTTTGCATCAGACTTCCGGCAATGGAAAAAAGAATGTTGAAAACAGTGGCACACAGAGGCACAATCATAAGACTCACAGTACATTTGCCAGTTTTTTCAGTTTGTGTCTTTCTGGGAATAGAAAGACAGCCTCAGAAGTTGTTGAGAGTGATGACAGAAAGAATACACACAAAGTCAGAGGCGCATCATCTGCAACAGATTTATCATCTGATAGTAACAAGAGTGGTTCATCAAAATGGAAGTTTTCTCAATCCTATGGATCGTCTAGCACTTCAAGTACTCAGCTTGGAGCTGGCAACTTCTCCTTTGAAGAAATTTACAAGGCAACAGCAAAATTCTCTCCAGCTAATAAGATTGGGGAAGGTGGGTTTGGAACAGTTTACAAGGGAAAGCTTAATGATGGAACCCTTGTGGCTGTAAAGCGAGGCAGGAAGGATGTGCATAACAAGAACTTAGCTGAGTTCAAGAATGAAGTAAACACCTTGTCAAAGATTGAGCATTTGAATCTTGTAAGGTTGTATGGATATTTGGAGCATCAAGATGAAAAGATTATTGTTGTTGAATATGTTAATAATGGCTCACTTCGGGAACATATAGATGGTATACGGGGAGATGGACTAGAAATTGGTGAGCGTTTAGACATAGCAATTGATATAGCTCATGCAGTTACTTACCTGCATATGTACACAGATCATCCAATTATTCATAGAGACATCAAAGCATCAAACATCCTACTTACTGACAAATTAAGGGCCAAAGTGGCAGACTTTGGTTTTGCTCGGCGTGCTGCTGAAGACCCTAATGCAACACATGTTTCAACTCAGATTAAAGGAACGGCTGGCTACATGGATCCTGATTACATGAGATCAAACAAACTTTCTGAGAAGAGTGATGTTTATTCCTTTGGTGTGTTGCTTGTTGAAATGGTGACAGGACGACATCCGGTTGAACCAAAGAGGCCTCTTAGTGAGAGAGTGACAATCAAATGGGCACTGCAGATGTTGAAACAAGGAGAAGTTGTGATTGCCATGGATCCAAGGCTGCGCAGAGGTCCAGCCTCAAACAAGGCAGTTGAGAAGGTTCTCAAGCTATCTTACCAATGCGTTGCGCCTTCAAGACAGTCAAGGCCATCCATGAAAAGCTGTGCAGAGGTTCTATGGGGAATCCGTAAAGATTATAGAGATAAAGTCTCTCATCATTCCCATGATTCTCACCATTCTGCAAATTTTCCTCATAGAGATGCTAAGAATAGGCATAAGTCATCTGGTATTGAAGATGATAATGGCCGTAGATTTGTCTCTGCATAG 1332 0.4144 MKKTQGPSSLHQTSGNGKKNVENSGTQRHNHKTHSTFASFFSLCLSGNRKTASEVVESDDRKNTHKVRGASSATDLSSDSNKSGSSKWKFSQSYGSSSTSSTQLGAGNFSFEEIYKATAKFSPANKIGEGGFGTVYKGKLNDGTLVAVKRGRKDVHNKNLAEFKNEVNTLSKIEHLNLVRLYGYLEHQDEKIIVVEYVNNGSLREHIDGIRGDGLEIGERLDIAIDIAHAVTYLHMYTDHPIIHRDIKASNILLTDKLRAKVADFGFARRAAEDPNATHVSTQIKGTAGYMDPDYMRSNKLSEKSDVYSFGVLLVEMVTGRHPVEPKRPLSERVTIKWALQMLKQGEVVIAMDPRLRRGPASNKAVEKVLKLSYQCVAPSRQSRPSMKSCAEVLWGIRKDYRDKVSHHSHDSHHSANFPHRDAKNRHKSSGIEDDNGRRFVSA* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0578 443 ProSitePatterns Protein kinases ATP-binding region signature. 127 149 IPR017441 GO:0005524
Dod05g0578 443 MobiDBLite consensus disorder prediction 53 68 - -
Dod05g0578 443 CDD STKc_IRAK 127 394 - -
Dod05g0578 443 MobiDBLite consensus disorder prediction 405 443 - -
Dod05g0578 443 SUPERFAMILY Protein kinase-like (PK-like) 95 397 IPR011009 -
Dod05g0578 443 MobiDBLite consensus disorder prediction 1 32 - -
Dod05g0578 443 PANTHER OS01G0253100 PROTEIN 1 431 IPR045271 GO:0004714|GO:0006468
Dod05g0578 443 Gene3D Transferase(Phosphotransferase) domain 1 198 424 - -
Dod05g0578 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Dod05g0578 443 SMART serkin_6 121 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0578 443 MobiDBLite consensus disorder prediction 69 103 - -
Dod05g0578 443 ProSiteProfiles Protein kinase domain profile. 121 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0578 443 Pfam Protein tyrosine and serine/threonine kinase 125 394 IPR001245 GO:0004672|GO:0006468
Dod05g0578 443 MobiDBLite consensus disorder prediction 1 23 - -
Dod05g0578 443 PANTHER OS02G0821400 PROTEIN 1 431 - -
Dod05g0578 443 MobiDBLite consensus disorder prediction 53 103 - -
Dod05g0578 443 Gene3D Phosphorylase Kinase; domain 1 76 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0578 Dod-Chr5 8380811 8385313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0578 69 394 Trihelix Transcription Factor Family AT1G70460 40.361 2.36e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Dod05g0578 PK_Tyr_Ser-Thr 3.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0578 - - gmx:100815871 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0578 05 8380811 8385313 Dod05g0578 05 8380811 8385313 ECH