Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0569 ATGAAGTGGGAAATAGAAGTACTCTCTCCTTCATCTGCACCTTATATTCACAACTCCTCCCATTGGCTTCTGGGAGATAATAATACTAATGTCAGGAGCACAAAATGGACCCCTGAAGAGAACAAACGCTTTGAGAATGCTCTTGCTTTGCATGATAAGGACACCCCAGATAGGTGGCATAGGGTGGCTGAGATGATACCAGGGAAGACTGTTGTTGATGTGATGAAGCAGTACAGGGAATTGGAAGCAGATGTCATTAATATAGAAGCTGGTTTGGTACCAATTCCTGGTTATAGTACCACAGCCTCACCCTTTACTTTGGATTGGGTGAGTAGTTCCGGGTATGATGGGTTTAAAGGAGTTGCTGCAAAGAGATCCTCCTCCAGAACTCCAGAACAGGAAAGGAAGAAAGGTGTGCCATGGACTGAAGAGGAGCACAAATTGTTTCTGCTGGGTCTGAAGAAGTATGGCAAAGGTGATTGGAGAAACATTTCACGCAATTTTGTTATCACCAGAACCCCAACACAGGTGGCTAGTCATGCACAGAAGTACTTCATCAGGCAACTTTCAGGGGGCAAAGACAAGAGAAGGGCTAGCATCCATGACATAACAACAGTTAATCTCACAGATAACAGAACTTCTCCTTCAGAAGACAGCAAGAGATCCACTTCACCACATCATTCCATGATGCTCTCACACCAGCAACAGCCAAATTCTACTGCTAGTACCACATCTACAGGGCATTTCCAGTGGAACAATAAGTCAAATTCAGGAGTAGCTATGACATTCAGTCCTGCACATGAAGAAGTATTCATGTCTTCACCTTATGGTGTTAACTCCTATGGTTTTAGGATGCAGGGCCAAAATCTGCATAAAAGTGCTCTTCATGAGTCTTCTTACCTAGGACATCAGACACAGAACATTGCTTTCCAAATGCAACCTTCCCAGCACTATTCCCATGCATGA 966 0.44 MKWEIEVLSPSSAPYIHNSSHWLLGDNNTNVRSTKWTPEENKRFENALALHDKDTPDRWHRVAEMIPGKTVVDVMKQYRELEADVINIEAGLVPIPGYSTTASPFTLDWVSSSGYDGFKGVAAKRSSSRTPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTDNRTSPSEDSKRSTSPHHSMMLSHQQQPNSTASTTSTGHFQWNNKSNSGVAMTFSPAHEEVFMSSPYGVNSYGFRMQGQNLHKSALHESSYLGHQTQNIAFQMQPSQHYSHA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0569 321 MobiDBLite consensus disorder prediction 225 251 - -
Dod05g0569 321 MobiDBLite consensus disorder prediction 196 251 - -
Dod05g0569 321 Gene3D - 28 95 - -
Dod05g0569 321 ProSiteProfiles Myb-like domain profile. 133 185 IPR001005 -
Dod05g0569 321 PANTHER MYB TRANSCRIPTION FACTOR MYB51 1 295 - -
Dod05g0569 321 Pfam Myb-like DNA-binding domain 140 185 IPR001005 -
Dod05g0569 321 Pfam Myb-like DNA-binding domain 35 80 IPR001005 -
Dod05g0569 321 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 295 IPR043363 -
Dod05g0569 321 Gene3D - 139 189 - -
Dod05g0569 321 ProSiteProfiles Myb-like domain profile. 28 82 IPR001005 -
Dod05g0569 321 CDD SANT 35 81 IPR001005 -
Dod05g0569 321 SMART sant 137 187 IPR001005 -
Dod05g0569 321 SMART sant 32 84 IPR001005 -
Dod05g0569 321 SUPERFAMILY Homeodomain-like 134 188 IPR009057 -
Dod05g0569 321 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Dod05g0569 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 189 IPR017930 -
Dod05g0569 321 CDD SANT 140 185 IPR001005 -
Dod05g0569 321 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 136 188 IPR006447 GO:0003677
Dod05g0569 321 ProSiteProfiles SANT domain profile. 141 189 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0569 Dod-Chr5 8242646 8245542 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod05g0569 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0569 - - gmx:100784163 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0569 05 8242646 8245542 Dod05g0569 05 8242646 8245542 ECH
Dod05g0569 05 8242646 8245542 Dod08g0724 08 8699820 8702135 ECH
Dod08g1080 08 13751003 13753805 Dod05g0569 05 8242646 8245542 ECH
Dod07g1487 07 40676384 40678908 Dod05g0569 05 8242646 8245542 ECH