Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0547 ATGGCAATGGAATGGGCTGGAGAATCAATTTATGGAGAGAAGTTTGCTGATGAGAACTTCAAGCTAAAGCACACTGGACCAGGATATCTATCAATGGCAAACGCTGGTCCTGATACTAATGGTTCACAGTTCTTCATTACTACTGTTACAACTAGCTGGTAA 162 0.4136 MAMEWAGESIYGEKFADENFKLKHTGPGYLSMANAGPDTNGSQFFITTVTTSW* 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0547 53 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 53 IPR002130 GO:0000413|GO:0003755
Dod05g0547 53 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Dod05g0547 53 Gene3D - 3 53 IPR029000 -
Dod05g0547 53 SUPERFAMILY Cyclophilin-like 4 53 IPR029000 -
Dod05g0547 53 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 6 53 - -
Dod05g0547 53 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 6 53 - -
Dod05g0547 53 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 53 IPR002130 GO:0000413|GO:0003755
Dod05g0547 53 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 9 52 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0547 Dod-Chr5 7931965 7932652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0547 7 46 U-box Gene Family AT5G67530 65.854 8.10e-12 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0547 K01802 - csin:114297209 101.293