Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0543 ATGACGACGACGACGACAACAACAACACAATACAACACTCTCACTTTTACCTTCGCCGTTATCCTCATTATAACCTCTGCTAACGCCCTCGGCTCCTCTTCCACCACCGCCGTCACCTACGCCACCTCCACCGTCTGCGCCATAGTCGCCGGAGACGCCAAACACTTCATCCGATGCTACCGACGACAAAATGATCAGAATTACTACTACCATTCTGCTGCTTTTGCACCGGCGGTGGTGCTTCCCGACGTTTCATTTCAGGCCATCTCCGGCGGCATGAGGTTCTTCTGCGGCCTACGTTCCGACGGTCTCAGCCTCCACTGCTGGGACACCGATGCACCAGGCTCGGTGTTTCTACCAAAGAGGATTTACCACAGTGAGGTGGTGCGGTTAACCGATGTAACGGTTGGTGATTCTCAGGTTTGTGCTAGAGAGTTGCATTCTGGTGTGGTAAGGTGTTGGAGAGGAGGCAGTGTTGAAGACGGGTTTGAGTTTCATTCACCAGGTGAGGGGTTTAGGTTCAGAAGCATCACTTCTGGGTGCGGTTTCTCTTGTGGGGTGTTGATGGAGAATGGGAAGGTTATGTGTTGGGGAGATGAGAGGGGGAATAATGCTGGTTTTGGTGGTAGTGAAATTCAGGAACAGTTTGGGAACTTGTCTATGTCTAGTTTGGTTGCTGGGGTGTCTCATGTTTGTGGCTTGACACTTGATGGGGTATTGGTCTGCAAAGGGAACAATGGTTCTGGTCAATTGGATGTTCCTTTCGGTTCAGGCCCTTCAGAGTTTGCAGGCCTTGGTTTGGGAGCAGATTTCACTTGTGGTATTAGGCGCAGGAATGGACTTCTTGTGTGCTGGGGAGGTGGTTCCAATCGTTTTGAGTTTGGTGGTGGTGGTGATGTTTCTTTTGAGTCAATTATTGCTGGTTTGGATTTTGTTTGTGGGGTGACAACTATGAATTTGTCTGTGATGTGTTGGGGTCCTGGTTGGTCTGGTAATAAGGCTAATTCTACTAGTGAGCTTCCATTGGGAATGGTTCTTCCTGGACAATGTGTTAAGGGTGGTTGTGGTTCTTGTGCTTCATATCCAAATTCTGATTTTCTGTGTCATGGTTCTGGAAGTATTTGTTATTCATGCCAGGCTGAGATTCCACTAGCAGTTCCATTGGTACCACCAACATCAACACAAGTTCCTCATGAACAGTCTTCTTCAGGTGAAGACAAAAACATGAGGGTGTTTTTGGCTACTTTGATTGTTGGATCAGTTGGGGCTTTTGCTGGTCTATGCACCATTCTTTATTTCCTTTGGATTGGAGCTAGAAGATTTTTCTTGAAAGCAAAAGTAGATGAGTCTGTGCAATCCCCAAGAGCTGAGTCTGGTGCCTATGTGGATATGGCTCCAATGCCTAATCGTGCTTCTAATGCCACAACATTAAGATCTCTTTCTAGCAGAAGGCAGAACAACTCAGGAACACTGAGGAGGCATCGGAGTGGTAATTCATCATCAAAGCATGTAGACAAGATTGAGAGTTTTTCATTATATGAACTAGCCACAGCCACTAACAACTTCTCAATGGATAATAAGATTGGTGCTGGTAGCTTTGGCAGTGTTTACAAAGGCAAGCTAGCAGCTGGCCCCGTTGTGGCCATTAAAAGAGGAGACACCAGCACTAAGAAGAAGAAATTCCAGGAGAAAGAAATTGCATTTGATTCTGAATTGGCATTGTTGTCGCGGCTTCACCACAAGCATTTGGTGAGGCTAATTGGTTTTTGTGAGGAGAATAATGAGAGGCTTTTGGTTTATGAGTACATGAGCAATGGCTCACTCCATGACCATTTGCATGACAAGAACAACACTGAGAAAAGTAGCAGTATTTTGAATTCTTGGAAGATTAGGATCAAGATTGCATTGGGTGCTGCTAGAGGAATTGAGTACATTCACAACTATGCAGTGCCACCCATTATTCACAGAGATATCAAGTCCTCAAATATACTTCTAGACTCAAATTGGAATGCTAGAGTTTCTGATTTTGGATTGTCACTTATTTGGCCTGAGACTGAGCAAGAATTGATGTCTACCAAGGCAGTTGGAACAGTTGGTTACATAGATCCTGAGTACTATGTCTTGAATGTGTTAACCACAAAAAGTGATGTTTATGGTTTAGGGGTGGTGTTGTTGGAGCTTATCACAGGGAAGAGAGCTGTGTTCAAAGCTGAAGATAAGTCTAGCCCTGTGGGAGTGGTGGAATATGCAGGGCCAAGAATAGCATCAGGAGATGTTTGGAGTGTGTTGGACTGCAGAGTTGGAAAACCAGAAGTTAATGAAGTTGAGCCTATTAAGCTCATGGCTTACACTGCTATGCATTGTGTGAACTTGGAAGGAAAGGAAAGGCCTGAAATGACTGAAATTGTTGCCAGCTTGGAGAGGGCATTGGCTTTTGTTGAGGGCAACCCGACAAGCCTATCTATTGCTTCATGTTCTAAGAGCTTTGTCCTCTAA 2496 0.4535 MTTTTTTTTQYNTLTFTFAVILIITSANALGSSSTTAVTYATSTVCAIVAGDAKHFIRCYRRQNDQNYYYHSAAFAPAVVLPDVSFQAISGGMRFFCGLRSDGLSLHCWDTDAPGSVFLPKRIYHSEVVRLTDVTVGDSQVCARELHSGVVRCWRGGSVEDGFEFHSPGEGFRFRSITSGCGFSCGVLMENGKVMCWGDERGNNAGFGGSEIQEQFGNLSMSSLVAGVSHVCGLTLDGVLVCKGNNGSGQLDVPFGSGPSEFAGLGLGADFTCGIRRRNGLLVCWGGGSNRFEFGGGGDVSFESIIAGLDFVCGVTTMNLSVMCWGPGWSGNKANSTSELPLGMVLPGQCVKGGCGSCASYPNSDFLCHGSGSICYSCQAEIPLAVPLVPPTSTQVPHEQSSSGEDKNMRVFLATLIVGSVGAFAGLCTILYFLWIGARRFFLKAKVDESVQSPRAESGAYVDMAPMPNRASNATTLRSLSSRRQNNSGTLRRHRSGNSSSKHVDKIESFSLYELATATNNFSMDNKIGAGSFGSVYKGKLAAGPVVAIKRGDTSTKKKKFQEKEIAFDSELALLSRLHHKHLVRLIGFCEENNERLLVYEYMSNGSLHDHLHDKNNTEKSSSILNSWKIRIKIALGAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETEQELMSTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVLLELITGKRAVFKAEDKSSPVGVVEYAGPRIASGDVWSVLDCRVGKPEVNEVEPIKLMAYTAMHCVNLEGKERPEMTEIVASLERALAFVEGNPTSLSIASCSKSFVL* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0543 831 SUPERFAMILY Protein kinase-like (PK-like) 497 806 IPR011009 -
Dod05g0543 831 Pfam Protein kinase domain 524 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0543 831 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 2 820 - -
Dod05g0543 831 SMART serkin_6 522 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0543 831 Gene3D Phosphorylase Kinase; domain 1 493 602 - -
Dod05g0543 831 ProSiteProfiles Protein kinase domain profile. 522 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0543 831 Gene3D Transferase(Phosphotransferase) domain 1 603 816 - -
Dod05g0543 831 MobiDBLite consensus disorder prediction 469 495 - -
Dod05g0543 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Dod05g0543 831 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 2 820 IPR044815 GO:0004674
Dod05g0543 831 SUPERFAMILY RCC1/BLIP-II 77 335 IPR009091 -
Dod05g0543 831 Gene3D - 84 402 IPR009091 -
Dod05g0543 831 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Dod05g0543 831 MobiDBLite consensus disorder prediction 465 503 - -
Dod05g0543 831 CDD STKc_IRAK 528 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0543 Dod-Chr5 7898095 7901641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0543 6 826 Receptor kinase-like Gene Family AT3G55950 49.289 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dod05g0543 Pkinase 6.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0543 - - gmx:100776682 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0543 05 7898095 7901641 Dod05g0543 05 7898095 7901641 ECH
Dod10g1820 10 39709390 39712384 Dod05g0543 05 7898095 7901641 ECH