Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0540 ATGAAGAAGATTTCAAATTCTACTTCTTCATCCCCACCATCATCATCCACCACCAGTTTAGACCAAACTATGAGCAACTCCAAAGGTGCCAATGCAGGGTGCCTCTCTGCAATCCTAAGAAGGATTCTTTGTTCTGGTGGCCTCCCAACACACCCATCTGATCAAATTAGAGAACAAGATTCAAATTCAATTGTGGGTGGTAGCAAAGATAAAAAATTTAAGGCTAAGCACCATGCTAATGCCACTAGTACTAGTACTAGTGCTACTACTACTGCTACTTCCACCAGTACTAGTACTTCTACTTCTACCACCACTCCTAATATAGTGGCAAGGTTAATGGGTTTGGATTCAATGGTGGAGGTACCTTCAAGTTCACTTTCACGTAGCAAATCCTTGAATTCTGTGGACTATTTGGGAGAATGCAATAGAATGGATGGTTTGCACAAGAGGGTCAACTCCACATTGTCCTTCAGGGAGGTGCCAACTTTCCTATTACTTGAAAATGACAACTTTTTTGTGCTTAGCTTTGAAACTGTAAGGGGTGAGGGTGGTAAAGAATCAAAATTGAAGTCTAGCGGGAGGAGAAGGGAAATGGATTGTGCAGAATTGAAGAAGAGAGAAAGGAGAGAAAGGGTTGAGTTGAATAAGGAGAACAAGAGAGAAAAGGGGTGTGATGAGAAGGGCAAAATGAGCAGAAGGGTAGTGTGTGATGATTTGTCTTGTGGAAGCGTTGGAAATCGCGGAAAACTAAGAGAGATCACCAACACTTGTCCTTCTAATCAGTTCAAGGCTTTTTCTGAGCTGAAGAAGAAGAAGTGTTTTGATTCAGAAGCAAGGAAATTGTCACAGCACAAGAACCGCAAGGAAGTTGTGGCTGGTGAGAAGATGAAGAGGAGGAGGAGGAGGAAGAAGAAAACAAGTTGTTGCACTGAGAAAAATGTGGAAACTGAATGCAAGTCAGAACAAGATTCAAGCCCAGTTTCTGTCCTTGATTTTGAGAGGGAACCTCGTGGAACAGTTGGTTTGAGTCCAAGGAGAAAATTATCACCAGAGCTTGAAAATGACCAGCAAGTTCTTCTGCGTTCTGATAGTAATTTGATGGTTGGAGAGAGGAAGGTTAGTGAAATTGAGAGCAACAAATGTGAAGGATCAAAGGAAAAAGGAAAGCATAGCCAGGAGTATATAGATATTTGGGGTCAAGTTTGCAAGATAGCTCAAGATGAATTGGCTGGATCAAATCAGATACATGCATGGATGAATAGACAAGATGATTTAGGAAGCATAGGTGCAGATTTTGAGTTAGCGATTTTTGATAACTTGTTAAATGAGCTGATTGATCAACTTGTTAAGGATCCAGTTACAACTTGGCAACTTGAAAAATTGTAA 1386 0.4098 MKKISNSTSSSPPSSSTTSLDQTMSNSKGANAGCLSAILRRILCSGGLPTHPSDQIREQDSNSIVGGSKDKKFKAKHHANATSTSTSATTTATSTSTSTSTSTTTPNIVARLMGLDSMVEVPSSSLSRSKSLNSVDYLGECNRMDGLHKRVNSTLSFREVPTFLLLENDNFFVLSFETVRGEGGKESKLKSSGRRREMDCAELKKRERRERVELNKENKREKGCDEKGKMSRRVVCDDLSCGSVGNRGKLREITNTCPSNQFKAFSELKKKKCFDSEARKLSQHKNRKEVVAGEKMKRRRRRKKKTSCCTEKNVETECKSEQDSSPVSVLDFEREPRGTVGLSPRRKLSPELENDQQVLLRSDSNLMVGERKVSEIESNKCEGSKEKGKHSQEYIDIWGQVCKIAQDELAGSNQIHAWMNRQDDLGSIGADFELAIFDNLLNELIDQLVKDPVTTWQLEKL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0540 461 MobiDBLite consensus disorder prediction 49 105 - -
Dod05g0540 461 Coils Coil 200 220 - -
Dod05g0540 461 MobiDBLite consensus disorder prediction 1 26 - -
Dod05g0540 461 PANTHER - 11 455 - -
Dod05g0540 461 Pfam DUF761-associated sequence motif 98 118 IPR032795 -
Dod05g0540 461 MobiDBLite consensus disorder prediction 79 105 - -
Dod05g0540 461 PANTHER OS05G0128300 PROTEIN 11 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0540 Dod-Chr5 7803022 7804566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0540 24 162 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 32.075 2.44e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0540 - - gmx:102660191 426.787