Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0532 ATGAGCTTCTTTGCATGTTGTACATCACAAGAGAGGATCAACAAGAAGCCACTGAAGAAGAACATTAAGGATTACCATGATGCAAAAACCCTACCATCATTTGCCAACCTCTCTTTCAAAACTGATAGCAGCAAGCGAAGGTACATGGAAGAAGAAGTAGAAAAATTTGCAAAAGGAAATGTGACCTCTCAGATTTTCTTTTATCCTGAGCTATGTGCTGCAACAAGGAACTTTCACCCTGACAATATGATTGGTGAAGGAGGCTTTGGAAGGGTATACATAGGATTCATTAAAAGCACAAATAAGGTTGTTGCTGTGAAGCAACTTGACAGGAATGGCTTTCAAGGAAACAGAGAATTTTTAGTAGAGGTTTTGATTTTGAGTCAATTGCATCACCCTAACCTTGTCAATTTGGTAGGGTACTGTGCTGATGGGGATCAAAGACTTCTGGTATATGAGTACATGGTGAATGGTTCTTTGGAAGATCACCTTTTTGGTAAGACTCCGGATAGAAAGCCTTTGGATTGGCGTACAAGAATGAAAATTGCAGAAGGTGCAGCCAAAGGACTTGAATATTTACATGAAGTAGCAGATCCACCAGTGATATATCGTGATTTCAAATCATCAAACATACTATTGGATGAAAACTTCAACCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATAAAACACACATATCCACTAGGGTGATGGGAACTTATGGTTATTGTGCTCCTGAATATGCCTTAACAGGGCAGTTAACAGCAAAATCAGACGTGTACAGCTTCGGAGTAATGCTTTTGGAGATGATCACAGGAAGAAGAGTGATTGATCATTTGAGACCATCTCGAGAGCAAAACTTAGTCACTTGGGCACAACCACTATTGAAAGACAGAAGGAAGTTTACATTAATGGCTGATCCATTGCTAGAAGGGAACTACCCCATTAAGAGTCTAATCCAAGCAGTAGCAGTTGCAAGAATGTGTCTTCAAGAGGAAGCTGATACCCGACCTTTGATTAGTGATGTAGTAACGGCACTTGATGCTTTAGCAAAGAAGCATGTAGCTGTTAGAAGTGGGTGA 1098 0.4044 MSFFACCTSQERINKKPLKKNIKDYHDAKTLPSFANLSFKTDSSKRRYMEEEVEKFAKGNVTSQIFFYPELCAATRNFHPDNMIGEGGFGRVYIGFIKSTNKVVAVKQLDRNGFQGNREFLVEVLILSQLHHPNLVNLVGYCADGDQRLLVYEYMVNGSLEDHLFGKTPDRKPLDWRTRMKIAEGAAKGLEYLHEVADPPVIYRDFKSSNILLDENFNPKLSDFGLAKLGPTGDKTHISTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVMLLEMITGRRVIDHLRPSREQNLVTWAQPLLKDRRKFTLMADPLLEGNYPIKSLIQAVAVARMCLQEEADTRPLISDVVTALDALAKKHVAVRSG* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0532 365 ProSiteProfiles Protein kinase domain profile. 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0532 365 CDD STKc_IRAK 84 355 - -
Dod05g0532 365 SUPERFAMILY Protein kinase-like (PK-like) 61 352 IPR011009 -
Dod05g0532 365 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Dod05g0532 365 Gene3D Phosphorylase Kinase; domain 1 37 154 - -
Dod05g0532 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Dod05g0532 365 PANTHER OS07G0668900 PROTEIN 1 362 - -
Dod05g0532 365 Gene3D Transferase(Phosphotransferase) domain 1 155 363 - -
Dod05g0532 365 Pfam Protein kinase domain 79 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0532 365 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0532 Dod-Chr5 7643647 7646681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0532 54 356 Glycoside Hydrolase AT3G07070 69.637 9.04e-155 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod05g0532 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0532 - - gmx:100798032 610.142