Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0530 ATGAACAACTTGGAGTCTTACCCTCCCATTCTCCGCCATCTCAGCCGCCACCACGACCACCACACATCTAAGTTAGGCTTGGATGACCCAGACGAAGCAATCAACCCGGCACAAGATCCAGACATAGATCTTGTGCCGGTCATAGATGTTGAGCGCTTAGACCATGACATAGAGAAGCTAGAGGATGCTTGCAAGGACTGGGGGTTGTTCCGTTTGGTCAACCATGGGCTTCCGTTGACCCTGCTGAAGCAACTTCAAGACCAGGCCAGAGAGCTATTCTCTATGCCCTATGAGTCCAAGCATGCCTCATGTAGTGGCAGCCCCGTGACATACTTTTGGGGCACCCCTGCCCTAACCCAATCGGGCACTGCCCTAACAAGGGGCCCCAAAAATATCAATTGGGTTGAAGGTTTCGATGTGCCGTTGGCTCGACTCTCCCAATTCCAGTCTCAACTTCCTTCTCTCGAGTCTATCAGACTGCTGCTAATGGACTACGAAACCCATTTGGCAAGAATTGCTACAACTTTATTCAAAGTCATGATGAAGAACCTTGACCTGAATCTGAAGCCTTCAGCAGCAGAGTCTTACTTATCAGAGAACACAGGGATTGTGCGTGTCTATCGCTATCCAAATTGTTCTGATACAAATGTTGGTTGGGGCATGGAGGCGCATACAGATAGCTCAGTCTTGTCCATACTGAACCAAGATGATGAAGTGAGTGGACTTCAGGTGCTCAAAGATGATCACTGGCTAACTGTAAAACCCATTCCCAACACATTGATTGTCAACCTTGGAGACATGATGCAGGCGATAAGCAATGACAGATACAAGAGTGTATCACACAGGGTGAAGGTAAACAAATATAGAGAGAGGATCTCAATAGGCTACTTTGTGTTCCCTGGTGAAGACGTTGTGATTGAGAGCTCTGAGTACAAGCCCTTTACTTACAGTGAGTTTAGAGCACAAGTGCAGCAAGACGTCAAGGCCCTTGGCTATAAAGTTGGGCTGGCAAGTGGAGAATTCTCGGAGCACAAAGCGTCAAAGAAGGTGAGGAGTGTGGAGCCGGGCTTTCTGGGCTCCTGGCACCTGGGGAAAGTTATCCAATGTGGGAAGCTGAAGCGCTATGTCAGATATGAGAACTTGTTAGATGATGATGGGGTGAATCATCTTGTGGATGAGGTGATTGTTCCAAAGGCATTGGATAGTGATGATAGTGATTCTTCAAATTGCTACATTCGTGGATCAATTAGGCCGATACCTCCTTTCATTGAATTTGAGGAACGTGAACTTGAACTCGGCCTGAGTGTTGATGTGGACCACCAGGAAGCTTGGTGGGAAGGTGTTATATTTGATCACTGCGATGGAAAGCAGGAGAGGAGTGTGTTTTTTCCGGATTTGGGTGACGAGATGAAGATTGAAGTTCATAAAATGCGGATTACTCATGATTGGGATGAAGCTACAGGGAAGTGGCGCCGAAGAGGGAAGTGGGTTTTTCTTGAATTGTTAGAAGAGTGTGAGAGGACATCATTTGTTGCAGTTTCAAAAAAGCAAGTTTGGTATGATGTAAGGACCAAAAAGGATTTTGTTAGGATTAAGGACTGGACTTATAATGTGAAAGACTTGTGGAGAGACCTGGTAATGGAGGTAGTTGGTGACTACTTATCTCTTACATTAGAAGAAATTTCCTCATCCTTAGACCTTCCAAGGAGTTTATTGAAAGAAACACAGGAGTTGGAGTCAGTTGAACCTAAGGCAATTGTCCACTCCAATCAGGAATGTTTCATTTCCTTACTATTTTTATTTTGGAAGTCCATATACCATACTACTTCAATGACATTGATTTTTATATGTAACAGGGGATTCCAAGTCAACAGTCAACTAGTAAAACTCTACCTAATGTGA 1902 0.4501 MNNLESYPPILRHLSRHHDHHTSKLGLDDPDEAINPAQDPDIDLVPVIDVERLDHDIEKLEDACKDWGLFRLVNHGLPLTLLKQLQDQARELFSMPYESKHASCSGSPVTYFWGTPALTQSGTALTRGPKNINWVEGFDVPLARLSQFQSQLPSLESIRLLLMDYETHLARIATTLFKVMMKNLDLNLKPSAAESYLSENTGIVRVYRYPNCSDTNVGWGMEAHTDSSVLSILNQDDEVSGLQVLKDDHWLTVKPIPNTLIVNLGDMMQAISNDRYKSVSHRVKVNKYRERISIGYFVFPGEDVVIESSEYKPFTYSEFRAQVQQDVKALGYKVGLASGEFSEHKASKKVRSVEPGFLGSWHLGKVIQCGKLKRYVRYENLLDDDGVNHLVDEVIVPKALDSDDSDSSNCYIRGSIRPIPPFIEFEERELELGLSVDVDHQEAWWEGVIFDHCDGKQERSVFFPDLGDEMKIEVHKMRITHDWDEATGKWRRRGKWVFLELLEECERTSFVAVSKKQVWYDVRTKKDFVRIKDWTYNVKDLWRDLVMEVVGDYLSLTLEEISSSLDLPRSLLKETQELESVEPKAIVHSNQECFISLLFLFWKSIYHTTSMTLIFICNRGFQVNSQLVKLYLM* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0530 633 MobiDBLite consensus disorder prediction 21 40 - -
Dod05g0530 633 Gene3D - 43 336 IPR027443 -
Dod05g0530 633 SUPERFAMILY Clavaminate synthase-like 37 324 - -
Dod05g0530 633 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 41 336 - -
Dod05g0530 633 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 3-LIKE ISOFORM X1 41 336 - -
Dod05g0530 633 Pfam 2OG-Fe(II) oxygenase superfamily 206 300 IPR044861 -
Dod05g0530 633 Pfam non-haem dioxygenase in morphine synthesis N-terminal 45 140 IPR026992 -
Dod05g0530 633 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 300 IPR005123 -
Dod05g0530 633 PRINTS Isopenicillin N synthase signature 60 77 - -
Dod05g0530 633 PRINTS Isopenicillin N synthase signature 260 286 - -
Dod05g0530 633 Pfam Agenet domain 350 421 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0530 Dod-Chr5 7617898 7632535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0530 351 569 PHD Transcription Factor Family AT5G58610 44.796 8.35e-57 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0530 - - gmx:100819244 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0530 05 7617898 7632535 Dod05g0530 05 7617898 7632535 ECH
Dod05g0530 05 7617898 7632535 Dod08g1046 08 13189143 13195954 PCT