Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0529 ATGGTAGTGGAGAATCATCTTCGCAGCATAAAGCGTAAAAAAGGAGGAGGAGGAGGCTTCACGAAGCGAAAACTCGACGTCAATGAAAGAGTCGAGGTGAGGAGTATGGAGGAGGGGTTTCTTGGCTCATGGCATCCAGGGACAGTTATCCGTTGTCGGAAGTGGAAGCGCTATGTAAGATATGAGAGCATTTTAGATGATGATGAAGTGAATTATCTTGTGGAAGAGGTGATTGTTTCGAAGGCATTGGATGGTCACAGTAATTCCTCAAATAGCAACAGGCGAGGTTCAATTAGGCCGCTACCTCCTTTGATTGCATTTGAGGGATGTGAACTTAAATTTGGTCTCTGTGTTGATGTCGACCATGAGGAGGCTTGGTGGGAAGGTGTAATATTTGATCACTGTGATGGACTGGAGGAGAGGAGTGTGTTTTTTCCGGATTTGGGTGATGAGATGAAGATTGGAGTTCACCAAATACGGATTACTCATGACTGGGATGAAGTTACAGGGAAGTGGCGGCGGAGAGGGAACTGGGCTTTTCTTGAATTGTTTGGGGAGTGTGAGAGGACATCATTTGTTGCAGTTTCAGCAAAGCAAGTTTGGTATGATGTACGAGTCAAGAAGGACTTCGCCAGGATTAGGGACTGGACTTTTGATGTGAAAGAGTTGTGGAGAAACTTGATAATGGAGGTAGTTAATGACTACTTAGCTCTTACACTAGGAGAAGTTTCCGCATTCTTAGACCTTCCTAGGAGTCTATTGAAAGAAATATTGGAGCTGGAGTCAGTTGAACCTAGGGCTAATGTCATTGACTTCATTCAGGAAGTTGACAATGCCAACTCTCTTGGTTTTGTGAATTCTGGCGGCCAATTGAGCAGTAGTGGCAACACAAATGCTCATTGTGAAGGTACTCCAAAGAATGCAATTGGTTCTGAAGAAGTCCCTGTGGAGAAAGGTGAGTCCTCAAACTTGTTAGATACTGTTCAAAACTATCCAACCATTATTCAGGATCAAGAGATTAATGATATGGATCCTTTGGTGGATGCCCCATCAAATATGCATATTATGGCAGAATTAAACATGACTTCCCCTCAGAAGGAAATTTTGGTGCAGAAAGAACCTGTTCTGCCTGTTCAACAAGTCTTAACTCAGGATCACAAAGAAATTTCCTGCCATGGTGTTGGTGGAACAATTTCAGATGCTAGCTGTTTGAAGAAAAATATAAAAGTTGGATGCTCTTCCAGACATTGGAAAACTCTGAGATGTTGGAAACCTCTGAGACTGTCTGGAGTTGAATTATGTCCTGATGCTGTTGAGCAATGTGCACTTCATTTTAGAAACAAGAAGGCTCTAATACTTTGGAAGGAAAAAGCATTGAAACATCTTGCACATCTTGGATGGGAAATTGAGTGGAGACAACGCAAATGCGGTTATCGTGACTACAAGTACACATCGCCTGATAAGCAGAACACTTACCTCTCTCTCAGTCAAGTTTGTAAAATTGTGGCAAAGAACTCAAACATGAACCCTTTGCTGTCCCAAAATGATCAGAGTATCGCAAAACCTCCAGCTGATGGTCATGTTTCACATATGCTTCCTGATCAATCAGAGAAGATTCAAGATCTTGATATTTTTCCTCCAAATGTGCCAGTTCCTCTGGTTGAAGATTTGGATGAACCTGAGTTTTGTCCTCAAGCTGTTTTAGAATATTACCTGAATGCATCTGTCTTGCAGGGGGCTGATAGAAGAAAATATATACTAAAAGCAAAGAACCATCTGATAGCAGAAGGGTGGAGCTATCACTATCCAGATCCAACTAATAGAAAAAAGGGATTGTTGTACACATCTCCGGAAAATAGGAGATTCAAAACACTCCACGCAGCATGTGGTTTTTGTATTGAACAAAGTATTCCTAAATGGACCATTTCTAGCTTGCAACCTTTGAATCTCCTGGACATTAAAGAAGAAAATTTTGACCCGATTTCAAGTGGTGATTTATTACATAGACTATCCCAGTTGCTTCCAAAGAAACCCAAGTTACATGCAACGGATGGCATAGCTGCGAGTAGATCAACTCAAAATCGGAAGCGGAAACGCTTGAAAAATTTGAAAGCCAGCCTAGCCAAGCGCCAAAGAAATGGATTGCCTTTACGGGTGCTACGATCTAGTAAAAGAGTGCAAAAGGTGTCTGCCCCTTGTCTGTCACATCAGAAGCCTCTAAATGTGCTGTCTTGGTTGATAGACAGTAATACTGTGTTACCAAGGTCTAAGGTTTATTACCAGTCAAAAGGCAGGCACCATACTTTGGTTGAGGGGAGAATAACTCGTGATGGAATCAAGTGTAACTGTTGTCAGAAAGTATATAGTCTTGCTGGCTTTGAAAACCACGCTGGCGGCAGTGGTACCAGCAGACCTGCTGCTAGCATCATCTTGGAAGATGGTAGGTCACTCTTAGATTGCCAGATACAAAGAATGGAAGATCGTATGACAAGGGAAACTGTGGGAAAACCAACAAATGACCTGTGTCAAGGGGAGAATGACTATATCTGTTCTGTTTGCCACTATGGTGGGGAACTAATTTTATGTGATCAATGCCCATCTTCATTTCATAGTATGTGTCTTGGTTTGGAGGACATCCCTGATGGTGAATGGTTTTGTCCATCATGTCGTTGTGTGATTTGTGGCCAAAGCAAAATCAATGGAACTGAGGATGAACATTTCCTTACTTGCATTCAGTGTGAACATAAATATCATGTTAGGTGCCTGAGGAAAAGAGATTTAGCTAAAGCGAGAAGATATCCTGAAAACTGGTTATGCGGAAAGGATTGTGAAAGGATATATGCAGGCCTCCATAAGCTATTAGGAGAGCCAGTTTCAGTGGGCATGGACAATCTAACTTGGACATTGGTGAAGTATATCAACTCTGAGAGTTGTGATCTTAGTAGTATGAAAGGTTACTCATTGGCAGAAAGTTACGGCAAACTCAATGTTGCTCTTTCGGTGATGCATGAATGTTTTGAGCCCCTAAAGGAATCTTCCACTACTAGAGATATTATGGAAGACGTTATATTCAGTAGATGGTCCACGCTTAATCGATTAAATTTCCAGGGTTTCTATATCATACTTCTGGAGAGAAATGAAGAACTGATTAGTGTAGCAACTGTTAGGGTTTATGGAAAGAAGGTAGCGGAAATACCTCTTGTTGGTACCAGATTACAGTATCGTCGACATGGAATGTGTCGAATTTTAATGAATGAGCTTGAAAAGAAGCTCATGCAGTTAGGAGTGGAGAGGCTTGTTTTGCCTGCTGTTCCTAGTGTGCTAGAAACATGGACTGGTTCTTTTGGCTTTGCAAAGATGACAGATTTTGAGAGATCACAATTTCTGGACAATACTTTTCTAGATTTTCAGGGTACCATCATGTGCCAGAAACTGTTGATGGAGATTCCATCCCCAGATTCAGTCTTGTTAATAGAGTCCCAACAAAAACCACATGATGTTTTGCTGGGAAGTTGTATAAACTATGATCAGTCCTGCCCAGTGTCTGAAGTAAACCAAGCAGAAGATATTGACCAAAGTGGGATGCTGGATCTACAAATGGGAGATTGTGCTGGCAACAATGATAATTGCGGTGATGGTGCTACTGTCCATGTTACCACGGTGAATCAACCAAGTCCTGAGGATCAACAGTGCCAGAATGGCACCAGTCCACAGAGCTCTATTGTAAAACAAGCTGATAGTTATAATGGCTCATATAAGTGCTACTTTAGAAGGAAGTTCACAAAGTCAAAGTAA 3795 0.4171 MVVENHLRSIKRKKGGGGGFTKRKLDVNERVEVRSMEEGFLGSWHPGTVIRCRKWKRYVRYESILDDDEVNYLVEEVIVSKALDGHSNSSNSNRRGSIRPLPPLIAFEGCELKFGLCVDVDHEEAWWEGVIFDHCDGLEERSVFFPDLGDEMKIGVHQIRITHDWDEVTGKWRRRGNWAFLELFGECERTSFVAVSAKQVWYDVRVKKDFARIRDWTFDVKELWRNLIMEVVNDYLALTLGEVSAFLDLPRSLLKEILELESVEPRANVIDFIQEVDNANSLGFVNSGGQLSSSGNTNAHCEGTPKNAIGSEEVPVEKGESSNLLDTVQNYPTIIQDQEINDMDPLVDAPSNMHIMAELNMTSPQKEILVQKEPVLPVQQVLTQDHKEISCHGVGGTISDASCLKKNIKVGCSSRHWKTLRCWKPLRLSGVELCPDAVEQCALHFRNKKALILWKEKALKHLAHLGWEIEWRQRKCGYRDYKYTSPDKQNTYLSLSQVCKIVAKNSNMNPLLSQNDQSIAKPPADGHVSHMLPDQSEKIQDLDIFPPNVPVPLVEDLDEPEFCPQAVLEYYLNASVLQGADRRKYILKAKNHLIAEGWSYHYPDPTNRKKGLLYTSPENRRFKTLHAACGFCIEQSIPKWTISSLQPLNLLDIKEENFDPISSGDLLHRLSQLLPKKPKLHATDGIAASRSTQNRKRKRLKNLKASLAKRQRNGLPLRVLRSSKRVQKVSAPCLSHQKPLNVLSWLIDSNTVLPRSKVYYQSKGRHHTLVEGRITRDGIKCNCCQKVYSLAGFENHAGGSGTSRPAASIILEDGRSLLDCQIQRMEDRMTRETVGKPTNDLCQGENDYICSVCHYGGELILCDQCPSSFHSMCLGLEDIPDGEWFCPSCRCVICGQSKINGTEDEHFLTCIQCEHKYHVRCLRKRDLAKARRYPENWLCGKDCERIYAGLHKLLGEPVSVGMDNLTWTLVKYINSESCDLSSMKGYSLAESYGKLNVALSVMHECFEPLKESSTTRDIMEDVIFSRWSTLNRLNFQGFYIILLERNEELISVATVRVYGKKVAEIPLVGTRLQYRRHGMCRILMNELEKKLMQLGVERLVLPAVPSVLETWTGSFGFAKMTDFERSQFLDNTFLDFQGTIMCQKLLMEIPSPDSVLLIESQQKPHDVLLGSCINYDQSCPVSEVNQAEDIDQSGMLDLQMGDCAGNNDNCGDGATVHVTTVNQPSPEDQQCQNGTSPQSSIVKQADSYNGSYKCYFRRKFTKSK* 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0529 1264 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 983 1152 IPR000182 GO:0016407
Dod05g0529 1264 SMART PHD_3 849 890 IPR001965 -
Dod05g0529 1264 SMART PHD_3 891 943 IPR001965 -
Dod05g0529 1264 SMART agenet_At_2 23 91 IPR014002 -
Dod05g0529 1264 SMART agenet_At_2 110 167 IPR014002 -
Dod05g0529 1264 Pfam Agenet domain 29 103 IPR008395 -
Dod05g0529 1264 CDD NAT_SF 1040 1101 - -
Dod05g0529 1264 PANTHER PHD ZINC FINGER PROTEIN 11 1200 - -
Dod05g0529 1264 SMART ring_2 891 942 IPR001841 -
Dod05g0529 1264 SMART ring_2 850 889 IPR001841 -
Dod05g0529 1264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 841 891 IPR013083 -
Dod05g0529 1264 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1030 1127 IPR016181 -
Dod05g0529 1264 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 11 1200 - -
Dod05g0529 1264 Pfam PHD-finger 849 891 IPR019787 -
Dod05g0529 1264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 892 946 IPR013083 -
Dod05g0529 1264 SUPERFAMILY FYVE/PHD zinc finger 825 890 IPR011011 -
Dod05g0529 1264 Pfam Tify domain binding domain 772 822 IPR032308 -
Dod05g0529 1264 ProSiteProfiles Zinc finger PHD-type profile. 847 892 IPR019787 -
Dod05g0529 1264 Gene3D - 994 1128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0529 Dod-Chr5 7600331 7610038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0529 34 251 PHD Transcription Factor Family AT5G58610 44.344 4.17e-53 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Dod05g0529 Agenet 3.9e-15 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0529 - - lang:109350262 1488.01