Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0522 ATGCTAACACAACAATCTGATTCACCCAACAACAACAAAACCATGAACCCTTTGAGCCAATTGTTTCAGAACATATTCTCAGACAACAGCAACATCATGCTTGCAGCAATAGTTTCATTGCTCCTTGTGATCCTCTTTGTGCTGCTGCTTCATCTCTATGCCAAGTGGTTCTTGGCTCAGGCACAGGCACAGGCACATGCCAGGAGGCGGCGACGCCGCCTCCGGCGAGCCACGGTGACAGTCTCTGATGTCCTTGGCCCTGCAAGATTCCACCACTTCCACAGCTTCAACATAGAGGACTCACCTATTTCAAGTATCAACTCCAAAGGGCTAGATTCTGCTATCATTGCAGCCATTCCAGTTTTCATTTATGCAGCTTCAGAAGCAGTGAAAGATGATGATCCTGGTGATAATGATGATGTCTATGATGAGAAGAACAAGGATGAACATGAACTTGAATGTGTGATTTGTTTGAGTGCTTTTGAGGATGGTGAGATGGGGAGGTGTTTGCCAAAATGTGGCCATGGTTTTCATGTGGAGTGCATTGACATGTGGCTGAGTACTCATTCCAGTTGTCCAATCTGCAGGGCTCCTATTGTTGGTGGAATTGTTGAGGTCATTGAGAATGATTCCCAATTGGGTTCTTTTGATGGGGGGGATCATGTTCATGATGATGCCTCCGCTTTGGTTGAGATTGTAGTTGATAATGGTACTCCAAGTTCTGAGATTAGAGAGAGTGAGAGTGGGAATGAGAATGGAGGTGCGAGTGATTCTGTCTCAGAATCTTCATCATCTTCGATGGTTGGTTGTTCTTTGAAGAAAATGCTTAGCAAAGTTTTCCCACCTTCCAATGTAAATGAATTACAAGCTTGA 873 0.4467 MLTQQSDSPNNNKTMNPLSQLFQNIFSDNSNIMLAAIVSLLLVILFVLLLHLYAKWFLAQAQAQAHARRRRRRLRRATVTVSDVLGPARFHHFHSFNIEDSPISSINSKGLDSAIIAAIPVFIYAASEAVKDDDPGDNDDVYDEKNKDEHELECVICLSAFEDGEMGRCLPKCGHGFHVECIDMWLSTHSSCPICRAPIVGGIVEVIENDSQLGSFDGGDHVHDDASALVEIVVDNGTPSSEIRESESGNENGGASDSVSESSSSSMVGCSLKKMLSKVFPPSNVNELQA* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0522 290 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 12 285 IPR044675 -
Dod05g0522 290 CDD RING-H2_EL5_like 153 196 - -
Dod05g0522 290 SMART ring_2 154 195 IPR001841 -
Dod05g0522 290 MobiDBLite consensus disorder prediction 239 266 - -
Dod05g0522 290 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 201 IPR013083 -
Dod05g0522 290 PANTHER - 12 285 - -
Dod05g0522 290 SUPERFAMILY RING/U-box 144 200 - -
Dod05g0522 290 Pfam Ring finger domain 153 196 IPR001841 -
Dod05g0522 290 ProSiteProfiles Zinc finger RING-type profile. 154 196 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0522 Dod-Chr5 7470325 7471197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0522 24 197 Rapid Response to Elicitors AT3G16720 36.782 7.48e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0522 - - adu:107473099 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0522 05 7470325 7471197 Dod08g1037 08 12994795 12995493 PCT