Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0520 ATGGATTTGGCCAAGGTGGGGTATGTGTTAGGCCTAAGGGTTTCTCCACATCATAGAAGAAGAGGGATTGGCTCAGGCCTTGTAAAGAGGCTAGAAGAATGGTTCACTGCCAATGATGTGGACTATGCATACATGGCCACAGAGAAAGACAACCAAGCCTCGGTGAGTCTTTTCATGGACAAGTTTGGTTACACCAAGTTTAGGACTCCAGCTATACTTGTGAACCCCGTGAACCACCACTCTTTCCAAATCTCATCCAACATTGAGATAGCAAGGCTCAAGGTTGAACAAGCTGAGTCACTCTATAGAAGGTTCATGAGCTCGACTGAGTTCTTCCCTAATGACATAGACAACATACTTAGGAACAAGCTAAGCTTGGGGACATGGGTGGCCTATTTCAAAAGGGATAGTATGTGGGGTGCTTTTGGGTCAAATGGACAACAAGTCCCAAATAGTTGGGCCATGCTTAGTGTATGGAATAGTGGGGAGATCTTCAAGTTAAGGCTAGGGAAGGCACCTTTCACTTGCTTGTTGTACACAAAGAGTTGGTGCTTGATTGATAAGATCTTCCCATGCTTGAAATTGCCAACTTTACCTGATTTCTTCAACCCTTTTGGGTTCTATTTCATGTATGGGGTGTACCATGAAGGGCCATTCTCAGGGAAGCTAGTGAGGGCCTTGTGCCAATTTGTGCACAACATGGCTTCAATGTCCAAAGATGAGAATTGCAAGATCATTGTGACTGAAGTTGGGGGAAGAGATGAGCTCAATGATCACATCCCACATTGGAAATTGCTCTCATGCCCTGAGGACTTGTGGTGCATAAAGGCCATGAAAAGTAATCAAGGGACAACAACAAACACTTTCCATGAGTTAACCAAAACCCCACCAACAACAAGGGCTCTTTTTGTGGACCCAAGAGAGGTTTAA 930 0.4473 MDLAKVGYVLGLRVSPHHRRRGIGSGLVKRLEEWFTANDVDYAYMATEKDNQASVSLFMDKFGYTKFRTPAILVNPVNHHSFQISSNIEIARLKVEQAESLYRRFMSSTEFFPNDIDNILRNKLSLGTWVAYFKRDSMWGAFGSNGQQVPNSWAMLSVWNSGEIFKLRLGKAPFTCLLYTKSWCLIDKIFPCLKLPTLPDFFNPFGFYFMYGVYHEGPFSGKLVRALCQFVHNMASMSKDENCKIIVTEVGGRDELNDHIPHWKLLSCPEDLWCIKAMKSNQGTTTNTFHELTKTPPTTRALFVDPREV* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0520 309 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 78 IPR000182 GO:0016407
Dod05g0520 309 Pfam Acetyltransferase (GNAT) family 5 64 IPR000182 GO:0016407
Dod05g0520 309 Gene3D - 1 71 - -
Dod05g0520 309 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 309 - -
Dod05g0520 309 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 4 68 IPR016181 -
Dod05g0520 309 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 309 - -
Dod05g0520 309 CDD NAT_SF 2 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0520 Dod-Chr5 7434522 7436695 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dod05g0520 Acetyltransf_1 5.7e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0520 - - adu:107473078 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0520 05 7434522 7436695 Dod05g0520 05 7434522 7436695 ECH
Dod05g0520 05 7434522 7436695 Dod08g1032 08 12908909 12910475 PCT