Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0513 ATGATCAACTACGACGGCGAGATACGGTACCACAAACCGGACAAGCTCTCCTATGTCAACGGCCACACCAAGATCCTCTACGTCAACCGCAATATCAGCCTCTCCCACATGCGCGACAAGCTCCTTAAGATCTGCAGGAAAGGTGTCAGAGAGTTCAAGTATCAGTTTCCCGGCGAGGACGACAGCATCCTCATCACCGTTCATGAGATGGACGACCTCGAAAACATGATGCGCGAGTACGATTAA 246 0.5122 MINYDGEIRYHKPDKLSYVNGHTKILYVNRNISLSHMRDKLLKICRKGVREFKYQFPGEDDSILITVHEMDDLENMMREYD* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0513 81 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 81 - -
Dod05g0513 81 Pfam PB1 domain 15 81 IPR000270 GO:0005515
Dod05g0513 81 Gene3D - 15 81 - -
Dod05g0513 81 SUPERFAMILY CAD & PB1 domains 14 81 - -
Dod05g0513 81 PANTHER OS05G0427100 PROTEIN-RELATED 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0513 Dod-Chr5 7252384 7252877 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0513 15 81 MAP Kinase Kinase Kinase AT1G79570 43.284 1.44e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0513 - - oeu:111394661 77.0257