LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod05g0513	ATGATCAACTACGACGGCGAGATACGGTACCACAAACCGGACAAGCTCTCCTATGTCAACGGCCACACCAAGATCCTCTACGTCAACCGCAATATCAGCCTCTCCCACATGCGCGACAAGCTCCTTAAGATCTGCAGGAAAGGTGTCAGAGAGTTCAAGTATCAGTTTCCCGGCGAGGACGACAGCATCCTCATCACCGTTCATGAGATGGACGACCTCGAAAACATGATGCGCGAGTACGATTAA	246	0.5122	MINYDGEIRYHKPDKLSYVNGHTKILYVNRNISLSHMRDKLLKICRKGVREFKYQFPGEDDSILITVHEMDDLENMMREYD*	82

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod05g0513	81	PANTHER	OCTICOSAPEPTIDE/PHOX/BEM1P	1	81	-	-
	Dod05g0513	81	Pfam	PB1 domain	15	81	IPR000270	GO:0005515
	Dod05g0513	81	Gene3D	-	15	81	-	-
	Dod05g0513	81	SUPERFAMILY	CAD & PB1 domains	14	81	-	-
	Dod05g0513	81	PANTHER	OS05G0427100 PROTEIN-RELATED	1	81	-	-

Showing 1 to 5 of 5 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod05g0513	Dod-Chr5	7252384	7252877	Proximal

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod05g0513	15	81	MAP Kinase Kinase Kinase	AT1G79570	43.284	1.44e-12	59.3

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod05g0513	-		-	oeu:111394661	77.0257

Showing 1 to 1 of 1 entries