Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0508 ATGGTGGTGTTTGTTGTGATGGTGGTTGTGTTTGTGTTTGTATTCCAGTTGAATATGAAACAAACTCAATGGTCGGCTCTGAACAACCAAGCGTTGGCGCTGCGAGCGATGAGAGAAAAGGTGCTGAGGGACCCAATGAAGGCGTTATGGGGTTGGAATGGCGAAGATGGATTTGTTGATCCGTGCTCTTGGTTCGGAGTGGAGTGCTCTGATGGCAATGTTGTCACCTTGAATTTGAAAGATTTACGTCTCCATGGAACACTAGCACCAGAAATCGGGAAGCTAACTCACATAAAATCAATCATTTTGCGTAACAATTCATTCTTTGGAGAAATCCCGAAGGAGATACTTCAATTAGAGGAACTAGAAGTTCTTGACTTGGGATATAACAACTTTAGTGGAACATTCCCATCTGACAACCTTGGCAGCAATCCATCCCTCACTACAATTTTACTGGACAACAATGACTATCTTGTCAACTTAAGCCCAGAAGTGTATAATGTCAAGACGATTTCTGAATTGCATGTACGTGAAGAACAACTAAGTGGTGCCAACACTAGAGGAGTATATGTTAGCAGGTCTAATTTCTGGCACACTAACCAACATGGAGATTTAGCATACAGGAGGCAACTTCTCCAAGTAGCAAAATCTTCTAAGAAACCAAAAACTAAGAGAGTTAATGCCAAAGAGACTATTTCACCGTCACCTTCACCTTTTCCCTCTTCATTATCACCAGATTCTGAGCATTTCTCACCATCACCATTGCTTTTTTCACCATCAGAAAGTCCCTCAAATTCACCATCATCATTAAGCTCTCCAGAAGCTTCCCCTTCAAAACCAAAGCACAATTCTGTGATGATTTGGTCCGCAGTTGGGGGATTCTCCTTCCTAATTTTGGTCTCAGCTATTGGTTTTGTTTGCTTCAGAAGTAACGAAGTTGTAAGTGTAAAACCTTGGGCCACGGGGTTGAGTGGCCAGCTACAGAAAGCATTTTTTATTTTAGGTGTTCCGAGTCTGAAACGAGCAGAACTTGAAGCAGCATGTGAAGATTTCAGCAACATTATTGGTACTCTACCAGATGGGACTGTTTATAAGGGGACTCTCTCTAGTGGAGTTGAGATAGCAGTAGCATCTTCTGCAATGACTTCATCCCAAAACTGGTCAAAAAGTATGGAAGCTCAATTCCAAAAGAAGATAGAGACGTTATCAAGGGTGAACCACAAGAATTTTGTGAATCTTATTGGGTATTGTGAAGAGAAAAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACACTATTTGAGCATTTACACATTAGAGAAGCAGAACAACTGGACTGGGAAATGAGAATAAGGATAGCTATGGGAATAGCCTACTATCTAGAGCACTTGCATCAACTGACACCACCCATTGCCCATAGGAACCTGCTATCTTCCACTGTATACCTGACTGAAGATTATGCTGCTAAGTTATCAGACCTTAGTTTCTGGCATGAAACAAAGGATTGGGCAGCAGAATACATAAGGGGGCAACCCTTGAGAGATTTGGTGGATACAAGCTTGAAAACTTTGCAAGATGCTGAAGTTGATAAATGGTCTGAAGTGATAAATAGCTGTGTTCATCCAGATCCAGAAAAAAGGCCAACTATGAGAGAGGTTGTTGCTAGGATGAAGGAAATCACTGCTATGGGGCCTGATGGAGCAACTCCAAAATCATCCCCTCTATGGTGGGCAGAAGTGGAAATTATGTCCCCTGTTTAA 1773 0.4191 MVVFVVMVVVFVFVFQLNMKQTQWSALNNQALALRAMREKVLRDPMKALWGWNGEDGFVDPCSWFGVECSDGNVVTLNLKDLRLHGTLAPEIGKLTHIKSIILRNNSFFGEIPKEILQLEELEVLDLGYNNFSGTFPSDNLGSNPSLTTILLDNNDYLVNLSPEVYNVKTISELHVREEQLSGANTRGVYVSRSNFWHTNQHGDLAYRRQLLQVAKSSKKPKTKRVNAKETISPSPSPFPSSLSPDSEHFSPSPLLFSPSESPSNSPSSLSSPEASPSKPKHNSVMIWSAVGGFSFLILVSAIGFVCFRSNEVVSVKPWATGLSGQLQKAFFILGVPSLKRAELEAACEDFSNIIGTLPDGTVYKGTLSSGVEIAVASSAMTSSQNWSKSMEAQFQKKIETLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWEMRIRIAMGIAYYLEHLHQLTPPIAHRNLLSSTVYLTEDYAAKLSDLSFWHETKDWAAEYIRGQPLRDLVDTSLKTLQDAEVDKWSEVINSCVHPDPEKRPTMREVVARMKEITAMGPDGATPKSSPLWWAEVEIMSPV* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0508 590 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 505 588 - -
Dod05g0508 590 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Dod05g0508 590 MobiDBLite consensus disorder prediction 228 278 - -
Dod05g0508 590 MobiDBLite consensus disorder prediction 216 278 - -
Dod05g0508 590 PANTHER PROTEIN MALE DISCOVERER 2 7 505 - -
Dod05g0508 590 SUPERFAMILY L domain-like 56 184 - -
Dod05g0508 590 Gene3D Transferase(Phosphotransferase) domain 1 433 502 - -
Dod05g0508 590 ProSiteProfiles Protein kinase domain profile. 349 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0508 590 SUPERFAMILY Protein kinase-like (PK-like) 335 560 IPR011009 -
Dod05g0508 590 Gene3D Transferase(Phosphotransferase) domain 1 503 570 - -
Dod05g0508 590 Pfam Protein tyrosine and serine/threonine kinase 355 504 IPR001245 GO:0004672|GO:0006468
Dod05g0508 590 Gene3D Ribonuclease Inhibitor 26 234 IPR032675 -
Dod05g0508 590 PANTHER PROTEIN MALE DISCOVERER 2 505 588 - -
Dod05g0508 590 Gene3D Phosphorylase Kinase; domain 1 327 431 - -
Dod05g0508 590 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0508 Dod-Chr5 7196905 7202974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0508 42 500 Receptor kinase-like Gene Family AT5G45780 28.602 4.23e-34 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dod05g0508 PK_Tyr_Ser-Thr 3.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0508 - - gmx:100814122 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0508 05 7196905 7202974 Dod05g0508 05 7196905 7202974 ECH