Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0504 ATGGTGGCCCACTTCTTTGTGGCGCACCGGGACACCAACTCGTACTACATTGTGTACAATGCCTCCCGGATCGCCATGCGCTACCTCAGGTTCTGTCCCACTGACGAGGAGTTGATCTCTTATTACCTCAGGAAGAAGCTTGAAGGCCATGAAGAGAGCGTTCAAGTGATTGCTGAGATTGAGCTTTGCAAATTTGAGCCTTGGGATTTGCCAGGTCTCGTAAGGGAAGAGTTTCAGTTTGGTGATAAAGTAGTCAATCTTGCTGAGGACGCAACGGGAGAGGCGCTCAATCCGGCACCGGAGGAGGACAAGGGAATGCAAGGAAGTCATGGGTGA 336 0.5149 MVAHFFVAHRDTNSYYIVYNASRIAMRYLRFCPTDEELISYYLRKKLEGHEESVQVIAEIELCKFEPWDLPGLVREEFQFGDKVVNLAEDATGEALNPAPEEDKGMQGSHG* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0504 111 Pfam No apical meristem (NAM) protein 29 74 IPR003441 GO:0003677|GO:0006355
Dod05g0504 111 MobiDBLite consensus disorder prediction 91 111 - -
Dod05g0504 111 ProSiteProfiles NAC domain profile. 25 111 IPR003441 GO:0003677|GO:0006355
Dod05g0504 111 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 29 71 - -
Dod05g0504 111 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 29 71 - -
Dod05g0504 111 SUPERFAMILY NAC domain 29 74 IPR036093 GO:0003677|GO:0006355
Dod05g0504 111 Gene3D NAC domain 34 92 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0504 Dod-Chr5 7087924 7096615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0504 29 71 NAC Transcription Factor Family AT3G49530 67.442 9.02e-17 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod05g0504 NAM 7.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0504 - - gsj:114373381 90.1225