Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod05g0489 | ATGGTGGGTTCATCACCTTGTGCTTCCTGCAAATTGTTGAGGCGTCGTTGCACTAAGGAGTGCATCTTTGCTCCTTACTTTCCTTCTGATGACCCCCGCAAGTTTGCCATTGTTCACAAGGTCTTTGGTGCTAGTAATATCAGCAAAATGCTGCAGGAGCTTCCAGTTCATCAAAGAGCAGATACTGTAAGCAGTTTAGTTTATGAGGCAAATGCAAGAGTAAGAGACCCTGTATATGGATGTGTTGGAGCCATATCATACCTGCAAAGCCAGGTTTCACAATTGCAAATGCAGCTTGCAGTGGCTCAGGCAGAGATTCTCTCCATACAGATGCAGCAAGAGCCTACCTTACCAACCCAAGTAGACCAAGATGACAGATTTATGCTCCTATCTGACAACAATGACTATGAAATCCTTCCTCAATACCTCAGCTTTGCTTCATCTTCTTCCTCATCTTCCAATGTATTCCAAGACTCTCATCAGCCTCTTAAGAGAGAGCCTTTTTGTTAA | 510 | 0.4392 | MVGSSPCASCKLLRRRCTKECIFAPYFPSDDPRKFAIVHKVFGASNISKMLQELPVHQRADTVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLQMQLAVAQAEILSIQMQQEPTLPTQVDQDDRFMLLSDNNDYEILPQYLSFASSSSSSSNVFQDSHQPLKREPFC* | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod05g0489 | 169 | ProSiteProfiles | LOB domain profile. | 5 | 106 | IPR004883 | - | |
Dod05g0489 | 169 | PANTHER | LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN | 3 | 167 | - | - | |
Dod05g0489 | 169 | Coils | Coil | 85 | 105 | - | - | |
Dod05g0489 | 169 | Pfam | Lateral organ boundaries (LOB) domain | 6 | 103 | IPR004883 | - | |
Dod05g0489 | 169 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 3 | 167 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod05g0489 | Dod-Chr5 | 6737591 | 6738602 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod05g0489 | 3 | 130 | AS2 family | AT2G30130 | 81.955 | 1.72e-76 | 225 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Dod05g0489 | LOB | 2.5e-42 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod05g0489 | - | - | gmx:100780073 | 259.996 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod05g0489 | 05 | 6737591 | 6738602 | Dod05g0489 | 05 | 6737591 | 6738602 | ECH |