Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0488 ATGTCGAAGGTGGTCTGTGTCACAGGAGCCAGCGGCGCCATCGGATCATGGCTGGTTCAGCTCCTCCTCGAGCGTGGCTACACTGTTCATGCCACCGTCCAGGATCTCAAGGATGAGAATGAGACCAAACATTTGGAGGCAATGGAAGGAGCAAAGGGTCGCCTCCACCTATTTGAGATGGATCTTCTAGACAGTGATTCAATAGCCGCAGCCATAAAGGGGTGTTCCGGAGTTTTCCACCTCGCATGTCCTAACAAGGAGATTTTGGAACCGGCGATAAAAGGGACGGTGAATGTGCTGAAGGCAGCTCAGGAAGCTGGGGTGGAGCGTGTGGTGGCGACTTCGTCGATTTCTGCGATAATTCCGAGTCCTGACTGGCCAGCCGACAAGATTAAGGGAGAGGACTGTTGGACCGACCTTGATTACTGCAGGGAGAAGGGGCTATACTATCCTATTGCAAAGACACTAGCCGAGAAATCGGGCTGGGATTTTGCTAAGGAGACCGGCTTCGATGTGGTAATGATAAATCCAGGCACAGCCTTGGGCCCTCTCATTCCACCAAGAATCAATTCCAGCATGGCCGTGCTTGTTAGCGTTCTCAAAGGTAATCACTTCTCGTTGACCCGAAAAGAAAAAGAATCACTTCTCCATGCAAATGGGCTATGCATTAGCAATTTCGCAGATTTTTGTGGTGGCGACAGCGACGGCGAAAGAGACAGTGATGGTGGTGGTGATAGAGACGGTGACAGCAACGAAGACAGAGACGACGAGGAAAAGGAGTCATTGTGCCTCTCTCGCAATTTGAGTTATTTGAAGGAGCTCATTGAAAGAAGTCATGGGTTGTTGAAGGAGCTTGTTGGGTGGGTTCCTGCTCAAGCGAAGCTCTTGAAGAACAACACCTGGTCAAGTAGTAGCACCTTTCTCTTCACAAAAATGGGATGA 942 0.5021 MSKVVCVTGASGAIGSWLVQLLLERGYTVHATVQDLKDENETKHLEAMEGAKGRLHLFEMDLLDSDSIAAAIKGCSGVFHLACPNKEILEPAIKGTVNVLKAAQEAGVERVVATSSISAIIPSPDWPADKIKGEDCWTDLDYCREKGLYYPIAKTLAEKSGWDFAKETGFDVVMINPGTALGPLIPPRINSSMAVLVSVLKGNHFSLTRKEKESLLHANGLCISNFADFCGGDSDGERDSDGGGDRDGDSNEDRDDEEKESLCLSRNLSYLKELIERSHGLLKELVGWVPAQAKLLKNNTWSSSSTFLFTKMG* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0488 313 Gene3D - 1 219 - -
Dod05g0488 313 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 206 - -
Dod05g0488 313 CDD FR_SDR_e 5 203 - -
Dod05g0488 313 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 206 - -
Dod05g0488 313 MobiDBLite consensus disorder prediction 234 249 - -
Dod05g0488 313 MobiDBLite consensus disorder prediction 234 260 - -
Dod05g0488 313 Pfam NAD dependent epimerase/dehydratase family 5 187 IPR001509 -
Dod05g0488 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 205 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0488 Dod-Chr5 6702714 6708658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0488 3 202 Monolignol Biosynthesis Gene Families AT5G58490 65.072 4.54e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0488 - - gmx:100806281 360.918