Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0482 ATGGCCACAGAAACAGCAAAGTTCCAAAACGCAGGGTTCCCCTCCGTCCCTGACATAACGGCGCCGTTAGCCTCCCACGACGGCCTCCGTTTCCACCAGTTCATGATCGCCGGCTCCGTCGCCGGCTCCGTAGAGCACGTGGCCATGTTCCCCGTCGACACCGTCAAGACCCACATGCAAGTCCTCAGCACCACCACCACGTGCCCACTCAAACGAAACGCCACCGTTTTGCGCTCCCTCCAATCCATCCTCCACTCCAACGGGCCCTCCGCACTCTACCGCGGCATCGCCGCAATGGGCCTCGGGGCCGGCCCGGCCCACGCGATCTACTTCTCATTCTACGAAACTTGCAAAACGTTCCTCTCACGTGAAGGGAACCCAAACAATGCGTTGGCGCACGCCGTATCCGGTGTGTGCGCGACCATCGTGAGCGATGCGGTGTTCACGCCGATGGACATGGTGAAGCAGAGGCTGCAATTGAGTGCGGGAGGGTACAGGGGTGTTTGGGACTGTGTTGGGAGGGTGATTAGTGCGGAAGGGTTTGGTGCTTTTTTCGCTTCGTATAGGACTACTGTGTTGATGAACGCTCCGTTTACTGCTGTCCATTTCGTGACTTATGAAGCTGCCAAACGCGGCCTTGTTGAGGTGTCACCGGATAGTGCTGATGATGAACGGTTGGTTGTTCATGCTACTGCTGGTGCTGCTGCCGGTGCTTTGGCTGCTGCGGTTACGACGCCGCTTGATGTGGTTAAAACTCAACTGCAGTGTCAGGGCGTCTGCGGATGTGAGAGGTTTAAAAGTGGGTCAATTGGGGACGTCATTAAAACAATAGTGAAAAAGGATGGATACAGAGGGCTCATGCGAGGATGGATTCCAAGAATGCTGTTCCATGCTCCTGCGGCTGCAATCTGCTGGTCCACATATGAAGCTGGGAAGGCCTTTTTTCATGAATTAAATCAGAGTAGTGACAGCGGCACTATCATATGA 987 0.5532 MATETAKFQNAGFPSVPDITAPLASHDGLRFHQFMIAGSVAGSVEHVAMFPVDTVKTHMQVLSTTTTCPLKRNATVLRSLQSILHSNGPSALYRGIAAMGLGAGPAHAIYFSFYETCKTFLSREGNPNNALAHAVSGVCATIVSDAVFTPMDMVKQRLQLSAGGYRGVWDCVGRVISAEGFGAFFASYRTTVLMNAPFTAVHFVTYEAAKRGLVEVSPDSADDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCERFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKAFFHELNQSSDSGTII* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0482 328 PANTHER MITOFERRIN-1-RELATED 6 323 - -
Dod05g0482 328 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 6 323 - -
Dod05g0482 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 212 IPR018108 -
Dod05g0482 328 PRINTS Mitochondrial carrier protein signature 95 115 IPR002067 GO:0055085
Dod05g0482 328 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Dod05g0482 328 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Dod05g0482 328 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Dod05g0482 328 PRINTS Mitochondrial carrier protein signature 143 161 IPR002067 GO:0055085
Dod05g0482 328 Pfam Mitochondrial carrier protein 129 214 IPR018108 -
Dod05g0482 328 Pfam Mitochondrial carrier protein 31 123 IPR018108 -
Dod05g0482 328 Pfam Mitochondrial carrier protein 225 316 IPR018108 -
Dod05g0482 328 Gene3D Mitochondrial carrier domain 213 327 IPR023395 -
Dod05g0482 328 SUPERFAMILY Mitochondrial carrier 28 309 IPR023395 -
Dod05g0482 328 Gene3D Mitochondrial carrier domain 13 211 IPR023395 -
Dod05g0482 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 314 IPR018108 -
Dod05g0482 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 120 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0482 Dod-Chr5 6660328 6664316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0482 2 324 Chloroplast and Mitochondria Gene Families AT1G07030 69.419 4.92e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0482 K15113 - gmx:100802640 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0482 05 6660328 6664316 Dod05g0482 05 6660328 6664316 ECH