Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0469 ATGGATGCCATTGCTGAACAAGTCATTGGAGGGTTGAGCTCTCTAGCCGTCAAAGAGTTTGGAATCATATGTAACCTCAAAGATGACAAACAAAAAATTGAGAGCATAGTCTTTGCAATAAAAGCCGTGCTGAAGGATGCAGAGGCAAAGGCCAACAATAATCAAGTTATTAGTAATTGGTTGGAGGATCTGAAAGATGTACTTTTTGATGCGGATGACTTACTAGATGATTTCTCTACAGATGCTTTGAGAAGGAAATTGATGACTGGAAATAAGATAATAAAAAAGGTACAAATTTTCTTCTCCAAACGAAACCAAATTGCCTATGCTTTTAAAATGGGCCATAAAATGAAAGAAATCAGGGAAAGGCTAGATGATATTGCAAATACTAGGCAGAAACTGCCTCTACAACTGACTGATCACCCTGTTGAGATTCCAGTTGTATACAGGCAAAGACAAACTTACTCTTTTGTGAGAGAAGATGAAATCATTGGGAGAGAAGAAGAAAGGAAACATCTTATAGATTATTTATTTGATGCCAATGTGACAGATAATGTTTCCGTGATTTCAATAGTTGGGATTGGAGGATTAGGTAAGACTGCACTTGCTCAACTGGTGTACAATGACAAGGCTGTCCAAGAATACTTTGAGCTCACAATGTGGGTCTGTGTCTCAGATGAGTTTGACATTTGCAAAATAGCTCAAAATATTCTCGGGGATGCCCAAAATGGTGTGGTTGAGCAGGTGCAACAAAACCTAAGAGACAAAATTCGAGGGAAAAAATACTTGCTTGTGTTGGATGACGTGTGGAACGAGGATCGTGAATTGTGGCATGGCTTGGAAAGCTTATTGATGGAAGGGGGAAAAGGTAGCAAGATAATTGTCACCACGCGTAGTAACACAGTAGAAAAAATAATGAGCACTTATAAATCCCTTGTATTGAAAGGTCTAGATTTCAAAAGATCTTGGAAAATATTCTGCCGAGTGGCTTTTGATGAGGGAAAAGAACCACATAATTCAGAATTGGTACCCATTGGAAAGGACATTGTTAAAAAATGTGGAGGAATGCCCCTAGCCATAAGAACGATTGGTAGCCTCTTATTTTCTCGAAACCTGGGGCAAAAAGATTGGGAATATTTCAGGGATGATGAATTTTCAAAAATTGAACAATCGTTAATTGGACGATCACAAATTGAACAACAGCAGAAACAAATCTTTTCAATTCTTAAGTTGAGTTATGATCATTTTCCCTCGTGTGTGAAAAATTGTTTTGCTTATTGTTCATTGTTTCCTAAGGATCATGAGATTGATAAAGTTGAACTCATTCGGTTGTGGATAGCTGTGGGATTTATTCAACTGTCAGGTGGCCACTAG 1374 0.3806 MDAIAEQVIGGLSSLAVKEFGIICNLKDDKQKIESIVFAIKAVLKDAEAKANNNQVISNWLEDLKDVLFDADDLLDDFSTDALRRKLMTGNKIIKKVQIFFSKRNQIAYAFKMGHKMKEIRERLDDIANTRQKLPLQLTDHPVEIPVVYRQRQTYSFVREDEIIGREEERKHLIDYLFDANVTDNVSVISIVGIGGLGKTALAQLVYNDKAVQEYFELTMWVCVSDEFDICKIAQNILGDAQNGVVEQVQQNLRDKIRGKKYLLVLDDVWNEDRELWHGLESLLMEGGKGSKIIVTTRSNTVEKIMSTYKSLVLKGLDFKRSWKIFCRVAFDEGKEPHNSELVPIGKDIVKKCGGMPLAIRTIGSLLFSRNLGQKDWEYFRDDEFSKIEQSLIGRSQIEQQQKQIFSILKLSYDHFPSCVKNCFAYCSLFPKDHEIDKVELIRLWIAVGFIQLSGGH* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0469 457 Pfam NB-ARC domain 172 414 IPR002182 GO:0043531
Dod05g0469 457 Pfam Rx N-terminal domain 7 94 IPR041118 -
Dod05g0469 457 PANTHER DISEASE RESISTANCE PROTEIN RP 25 453 IPR044974 GO:0006952
Dod05g0469 457 Gene3D - 147 313 IPR027417 -
Dod05g0469 457 Gene3D - 317 412 IPR042197 -
Dod05g0469 457 PRINTS Disease resistance protein signature 353 367 - -
Dod05g0469 457 PRINTS Disease resistance protein signature 256 270 - -
Dod05g0469 457 PRINTS Disease resistance protein signature 188 203 - -
Dod05g0469 457 PANTHER OS08G0543100 PROTEIN 25 453 - -
Dod05g0469 457 Gene3D - 413 453 IPR036388 -
Dod05g0469 457 Gene3D - 5 120 - -
Dod05g0469 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0469 Dod-Chr5 6571195 6572568 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0469 185 455 WRKY Transcription Factor Family AT5G45050 23.345 3.54e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0469 - - aprc:113867585 583.178