Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0455 ATGGCCTCTTCTTCCTGTAGTAGCTTAGACACCCCATCAACCTCTTTCACCTTCTCCACAACACAATCCTTCATGACAAGCTCTTTCTCTGATCTCTTTGCTTCTTCTTCTTCTCACACTGATAACAACAACAATAACAGCTTAGGATTCTCCGAAAGGCCACAAGGGTTGTTGGATCCAATTCCAAAGTTCAAGTCCATGCCACCACCTTCTATTCCTCTCTCTCCCTTTTCTCCTTCTAACTATAATATCCCTGCTGGTTTGAGCCTTGCTGAGCTTCTTGACTCACCGGTTCTCGTTAACTCTTCTAATATTCTGCCATCACCAACAACTGGAGCAATTGCTTCTCAAGGCCTCAATTGGAAGAGCAATTCTGTGGAAAACCAGCAGAATATCAAAGAAGAAGACAAAAACTTCTCAAAATTTTCCTTCCAAACCCAACCAAGACCTCCTTTTCCATCTCAAGTTCAAGGGCAACATGCATGGGGTATTCAACAAGCCCCCAAACAAGAAAGTTTTTCTTCTGGAATGAGTGTGGTGAAGACTGAGAACTCTTGTTCCATGCAGAGTTTCTCTCCTGAGATCCATACTAGTGTCCAAAATAACCACAAGGGCGGTTTTCAATCTGATTCTAGGAATTACCAGCCACAGCCACAAGTTCAGACCTTAAGCAGAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGGCAGAAACAAGTGAAAGGAAGTGAGAATCCAAGGAGTTACTATAAATGCACATACCCCAATTGCCCCACAAAGAAAAAGGTTGAGAGGTCTTTATTAGATGGGCAAATCACTGAGATAGTTTACAAAGGTGCTCATAACCATCCAAAGCCACAATCTGCAAGGAGGAACTCATCCTTTGCATCTTCACTTCCTTCTTCCGATCATGTTAGCAATGACATGCAAGATCAATCATATGCCACACATGGCAGTGGACAGATGGATTCTGTGGCCACCCCAGAGAATTCATCAGTATCCATGGCAGATGATGATTTTGAGCAGAGTTCCCAGAAGAGTAAATCAGGAGATGAGTTTGATGAAGATGAACCTGATGCCAAGAGATGGAGAATAGAAGGCGAAAATGAGGGTATATCAGCCGCTGGAAGCAGAACAGTGAGAGAACCCAGAGTTGTAGTTCAGACAACAAGTGACATCGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTTGTGAAGGGAAATCCAAATCCAAGGTAA 1257 0.4304 MASSSCSSLDTPSTSFTFSTTQSFMTSSFSDLFASSSSHTDNNNNNSLGFSERPQGLLDPIPKFKSMPPPSIPLSPFSPSNYNIPAGLSLAELLDSPVLVNSSNILPSPTTGAIASQGLNWKSNSVENQQNIKEEDKNFSKFSFQTQPRPPFPSQVQGQHAWGIQQAPKQESFSSGMSVVKTENSCSMQSFSPEIHTSVQNNHKGGFQSDSRNYQPQPQVQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLLDGQITEIVYKGAHNHPKPQSARRNSSFASSLPSSDHVSNDMQDQSYATHGSGQMDSVATPENSSVSMADDDFEQSSQKSKSGDEFDEDEPDAKRWRIEGENEGISAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0455 418 MobiDBLite consensus disorder prediction 287 341 - -
Dod05g0455 418 MobiDBLite consensus disorder prediction 281 378 - -
Dod05g0455 418 Gene3D WRKY domain 215 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0455 418 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 59 418 - -
Dod05g0455 418 MobiDBLite consensus disorder prediction 34 52 - -
Dod05g0455 418 MobiDBLite consensus disorder prediction 197 227 - -
Dod05g0455 418 ProSiteProfiles WRKY domain profile. 228 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0455 418 ProSiteProfiles WRKY domain profile. 392 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0455 418 MobiDBLite consensus disorder prediction 143 179 - -
Dod05g0455 418 SMART WRKY_cls 227 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0455 418 MobiDBLite consensus disorder prediction 197 256 - -
Dod05g0455 418 MobiDBLite consensus disorder prediction 34 72 - -
Dod05g0455 418 Pfam WRKY DNA -binding domain 398 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0455 418 Pfam WRKY DNA -binding domain 228 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0455 418 SUPERFAMILY WRKY DNA-binding domain 226 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0455 418 MobiDBLite consensus disorder prediction 342 369 - -
Dod05g0455 418 Gene3D WRKY domain 384 418 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0455 418 SUPERFAMILY WRKY DNA-binding domain 389 418 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0455 418 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 59 418 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0455 Dod-Chr5 6429712 6433459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0455 225 418 WRKY Transcription Factor Family AT2G38470 63.547 2.68e-72 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod05g0455 WRKY 7.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0455 K13424 - gmx:100127393 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0455 05 6429712 6433459 Dod08g0974 08 12153698 12156588 PCT