Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0449 ATGGAGGCTGAAGCTGACTCAAGAGACACCTCTCTCATTCTTATTAAGCAAGGAGCTGAAGCTAGAGTGTTCGAGTCTTCTTTTGTGGGAAGGAGGTCTGTTATCAAGGAACGTTTCTCAAAGAAGTACAGGCATCCAACTTTGGATTCTAAATTGACTCTCAAGCGATTAAATGCGGAGGCTAGGTGCATGACAAAGGCAAGGCGACTCGGGGTTTGTACTCCGGCACTGTATGCTGTGGATCCTGTTTTGCACACTTTGACATTTGAGTTTGTTGAGGGACCTTCAGTCAAAGATGTACTTCTTGAATTTGGGTCACGTGGCATCACTGAAGAGCGACTGGACAATATTGCATCCCAGATCGGCAATGCAATTGGTAAGTTACATGATGGTGGCCTTGTTCATGGTGATTTAACGACGTCGAATATGTTACTGAAGAATGATACCAATCAGTTGGTTCTCATTGACTTTGGTTTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGAGCCCTTATTTCAATGCATTCTTCATGTGGGAATGTGATGGATCGGATACTTGCTGCGTACCGTAAGTCATCGAAGCAGTGGTCATCCACATTGAACAAACTGGCACAAGTGCGGCAAAGAGGAAGGAAGAGGACCATGGTAGGATGA 681 0.4435 MEAEADSRDTSLILIKQGAEARVFESSFVGRRSVIKERFSKKYRHPTLDSKLTLKRLNAEARCMTKARRLGVCTPALYAVDPVLHTLTFEFVEGPSVKDVLLEFGSRGITEERLDNIASQIGNAIGKLHDGGLVHGDLTTSNMLLKNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALISMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0449 226 CDD PKc 17 160 - -
Dod05g0449 226 ProSiteProfiles Protein kinase domain profile. 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0449 226 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 1 226 IPR022495 GO:0004674
Dod05g0449 226 SUPERFAMILY Protein kinase-like (PK-like) 14 174 IPR011009 -
Dod05g0449 226 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0449 226 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 14 220 IPR022495 GO:0004674
Dod05g0449 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Dod05g0449 226 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 1 226 - -
Dod05g0449 226 Gene3D Transferase(Phosphotransferase) domain 1 106 223 - -
Dod05g0449 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Dod05g0449 226 Pfam Protein kinase domain 41 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0449 Dod-Chr5 6370796 6373621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0449 87 176 EF-hand Containing Proteins AT3G50530 38.043 1.44e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod05g0449 Pkinase 1.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0449 K08851 - jre:109018511 405.601