Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0447 ATGCATCGGTACACACATGAAGCGCGGCCAGAGCTAGTGAAAGTCAAGAACAGCTATAAATACGTACTTACGTCCCATGTTTCAAATGTCATCAACACAAACAACTCTCCAAATTTAAACCTACCTATTTCCATGGCATCCCTCAAGCTTGACATTAAAGATGTTGTGCTTGTCAAACCATCAAAACCCACTCCTTTCTCTATTATCTCTCTGTCTACAGTTGATAATAGACCTGAACTCAACACCCTATGCCAAACCATTCATGTGTACCAATCACCAAATCACAATGATGATTCCCCAAATGGCCATCTAGACCCTGCACTTGTGATCAAAGAAGCACTCTCAAAGGCTTTGTTTTACTATCACCCTCTTGCAGGTAAGCTAGTAAAACATGTTGATGGGAAGCTTAGAATCCATTGCAATGCTGATGGAGTTCCATTCATAGAGGCCATTGCTAACTGCAACCTTTCTTCTCTTCATTACCTTGATGGTAGTGACACAAAAATTGCAAAAGACTTGGCCTTTGATCTTCCTTCACAAGATGAAAATGGTTACCAATACGCTTTGGGGTTCAAGGTGACCCGGTTTCAATGTGGAGGTTTCACAATTGGAATTGGGGCATCACATGCTGTTTGTGATGGAAGTGGGGCATCTCAATTCTTCAGAGCCATTTCTGAACTTGCAAGTGGGGAAAGTGAGCCCTCAGTGAAACCTGTGTGGGAGCGGGAGAGACTAATGGGGTCAATTACCAAACAGCCCTTGCAAATTCCCATGGATAAGGACTCAGCTGCAATTTCACCTTTCTTGCCAACCGAAGTTCTCATGCATGAATACTTTGAGGTGGACATTGAGAGCATAACGAGGCTCAAGTTGAGTTTGATGAAGGAAATTAGTAGTGACAATAATAATACTGACACTATGAAGGAATCTGAAAGATTCACAAGTTTTGAATCCCTTGGTGCATATGTTTGGAGGTCAAGAACTAGAGCCTTGAAACTCAACTATGACGGGAAAACTTCACTGGCTATAGTAGTTGGGATGAGAAGGCACTTGTTGGATCCTCCTTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGATCCAAAAGTTGTGTTAACAGTGAGGGAACTCAATGAAGGACCACTCTCACATGTGGTGAGGATAATCAAGGAGACTAAGAAGGCTGCTTCTACAAGGGACTACATTAGAGAATCGATTAACACACTGGAGGCAAATTTGGGGCGTTTTGATTATCAAGGTATTGGTGCATCCTTGGTTTTGAGCAACTGGATGCATCTGAGTATGTTGGAGAACATGGATTTCGGATGGGCGGAACCGGTGAACATTGTTCCTGCCCCATGTGGCATGTTTGGGACAGTGGGTATGTGCATTTTCTCACCTCCTAGTAACTTGGTTCCATCAATGAATGGAGGTGTTAGGATATTAGTTTCCCTCCCTAGTGCTGCCATACCTAAGTTCAGGGAGGAGATGGAAGCACTCAAGCTTATTAAACCATAG 1518 0.4315 MHRYTHEARPELVKVKNSYKYVLTSHVSNVINTNNSPNLNLPISMASLKLDIKDVVLVKPSKPTPFSIISLSTVDNRPELNTLCQTIHVYQSPNHNDDSPNGHLDPALVIKEALSKALFYYHPLAGKLVKHVDGKLRIHCNADGVPFIEAIANCNLSSLHYLDGSDTKIAKDLAFDLPSQDENGYQYALGFKVTRFQCGGFTIGIGASHAVCDGSGASQFFRAISELASGESEPSVKPVWERERLMGSITKQPLQIPMDKDSAAISPFLPTEVLMHEYFEVDIESITRLKLSLMKEISSDNNNTDTMKESERFTSFESLGAYVWRSRTRALKLNYDGKTSLAIVVGMRRHLLDPPLPEGYYGNAFVDPKVVLTVRELNEGPLSHVVRIIKETKKAASTRDYIRESINTLEANLGRFDYQGIGASLVLSNWMHLSMLENMDFGWAEPVNIVPAPCGMFGTVGMCIFSPPSNLVPSMNGGVRILVSLPSAAIPKFREEMEALKLIKP* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0447 505 Gene3D - 271 497 IPR023213 -
Dod05g0447 505 PANTHER ACYL TRANSFERASE 4 45 501 - -
Dod05g0447 505 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 45 501 - -
Dod05g0447 505 Pfam Transferase family 49 499 - -
Dod05g0447 505 Gene3D - 44 257 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0447 Dod-Chr5 6339848 6342976 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0447 48 495 Monolignol Biosynthesis Gene Families AT5G48930 26.539 3.22e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0447 K20240 - gmx:100801843 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0447 05 6339848 6342976 Dod05g0447 05 6339848 6342976 ECH