Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0444 ATGCCTTCAAGTTCTCTTCAATGGTTAAGCCTTGTAGGCATCATTTGGCTCCAAGCCATAAATGGGACAAACACCAACTTCCCTGCTTACTCTTCCCAGCTTAAGCAGCTTCTTTCCATTTCCCAAGTTCAGCTCAATAATCTTGCTTTTGCTTCTGATGCAGGAAAACTACTTGGTTGGTTTTCTGGCCTTGCTGCTGTTTACCTTCCCCTTTGGCTTGTCCTCTTGATTGGTTCAACTCTAGGCCTAATTGGCTATGGTGTGCAATATCTCTTCATAACCAACCAAATTTCCTCCTTGTCCTATTGGCATGTCTTTTTACTAACTTTCCTTGCTGGGAATAGTATTTGTTGGATTAACACAGTTTGTTATGTTGTCACAATAAGAAACTTCTTATCTGATAGCCAAGTTGCTGTTGGAATAACCACTAGTTACCAAGGATTAAGTGCAAAGATTTATACCAATATTGTTGATGCCTTCTCTCCGCACAAGAAAGCTAGAGCATTTCTCTTTTTAAACTCCCTTTTACCTGTGATAATTGTCCTAGTAGTAGCACCTGTAGTCAGAGCAGTTGAAGTCACTAGTTCTAAGGACACTCGTGTTGGATTTGCTGTGATGTTTGTGATCACAATTGCCACTGGAATATATGCTGTTTTGAGCAGCTTGCAATTTCTCACAAGCAAAATGTCCCCACTTGGTATCCTAATTGGTATCCTAGTATCCCTTCTTTTGCCTCTGTTAGTCCCAGTTACTGTGAAGATCAAGGAACTAATAGGTTCATGGCATTCAAATAGAGAAAAACTAAGAGTCTACCATTTCACTTTGGAGGAGAACACTAATGAGGAGAGGGCAGAGAATGAGGTCAAAGAGGGTGAAGACACCAGTAATCAAGTCAAAGAAGTTGTTGTCAGAGAAGAAATTGGAGTGAAATTCATGCTGAGAAGAATAGACTTCTGGCTATATTTCTTTGTCTACTTTTCGGGTGCAACAATTGGATTAGTATTTCTCAATAACTTGGGCCAAATAGCTGAATCCCGGGGATGCTCTAACACCTCATCTTTGGTGTCTTTGTCTTCATCTTTTGGTTTCTTTGGCCGTCTCATGCCATCTCTCTTTGACTACTTCCACAGGGGAAAGCCTACAATTTCAAGGCCAGCCTGTATGGTGGCACTGATGGCTCCAACAGCAGCTGCATTCTTCTTGCTACACAACAGCACTGACCTTGTACTCTACATAAGCACAGCAGTGATTGGAGTGTGCAGTGGAGCAATAACTTCCATTGCTGTTTCCACAACCACTGAGCTTTTTGGCACAAAGCACTTCTCTGTGAACCATAATGTGGTTGTGGCCAACATTCCAATGGGGTCCTTCTTGTTTGGCTACTCTGCTGCACTTGTTTACCGCAAGGAAGGGAATGGACTTGGGAAATGCATGGGCATGGAATGCTACAAAAGTACTTTTATCATCTGGGGCTCCTTTTGTGTTCTTGGAACTTTCTTGGCCTTGATTCTACATGCCAGGACTCGCAAATTCTACTCACAAAAACAATAG 1551 0.421 MPSSSLQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLLGWFSGLAAVYLPLWLVLLIGSTLGLIGYGVQYLFITNQISSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLSDSQVAVGITTSYQGLSAKIYTNIVDAFSPHKKARAFLFLNSLLPVIIVLVVAPVVRAVEVTSSKDTRVGFAVMFVITIATGIYAVLSSLQFLTSKMSPLGILIGILVSLLLPLLVPVTVKIKELIGSWHSNREKLRVYHFTLEENTNEERAENEVKEGEDTSNQVKEVVVREEIGVKFMLRRIDFWLYFFVYFSGATIGLVFLNNLGQIAESRGCSNTSSLVSLSSSFGFFGRLMPSLFDYFHRGKPTISRPACMVALMAPTAAAFFLLHNSTDLVLYISTAVIGVCSGAITSIAVSTTTELFGTKHFSVNHNVVVANIPMGSFLFGYSAALVYRKEGNGLGKCMGMECYKSTFIIWGSFCVLGTFLALILHARTRKFYSQKQ* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0444 516 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 515 - -
Dod05g0444 516 SUPERFAMILY MFS general substrate transporter 4 510 IPR036259 -
Dod05g0444 516 Coils Coil 281 301 - -
Dod05g0444 516 CDD MFS_Mch1p_like 6 498 - -
Dod05g0444 516 Gene3D MFS general substrate transporter like domains 7 508 IPR036259 -
Dod05g0444 516 Pfam Nodulin-like 7 250 IPR010658 -
Dod05g0444 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0444 Dod-Chr5 6285657 6287842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0444 1 515 Nodulin-like Gene Family AT2G30300 50.474 6.25e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0444 - - gmx:100800763 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0444 05 6285657 6287842 Dod05g0444 05 6285657 6287842 ECH
Dod05g0444 05 6285657 6287842 Dod08g0964 08 11958214 11960481 PCT