Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0424 ATGCCGGAAATCGAAGACCACACGCCGCCTTCACCGACGGAGCAAACCGCCTTATTCGGGAAATACGAGCTGGGTCGATTACTCGGTTGCGGCGCGTTCGCGAAAGTTTACCACGCGCGGAACCTCGAGCGTGGGCAGAGCGTGGCGGTCAAGATCATAAGCAAGAAGAAGATAGAGGGAACCGAATTAGCTGGTAACGTGAAGCGCGAGATCTCGATCATGAGCATGCTGCACCACCCTCACATCGTGCGGCTCCACGAGGTTCTCGCGACGAAGACAAAGATCTTCTTCGTGATGGAGTTCGTGAAGGGTGGGGAATTATTCGGTAGGATCGCGAAGGGGAGGTTCTCGGAGGATCTCAGCCGTCGGTACTTCCATCAGCTGATCTCGGCCGTTGGATACTGCCACTCGCGTGGGGTGTTCCATCGTGATTTGAAGCCGGAGAATCTGTTGCTTGATGAGAACGGGGATTTGAAGGTGTCGGATTTTGGATTGAGCGCGGTGAGGGACCAGATACACCCGGATGGGTTACTACATACGCTATGTGGGACCCCTGCTTACGTGGCACCCGAGGTTCTTGCGAAGCGAGGCTATGACGGTGCAAAGGTTGATGTCTGGTCATGCGGCGTCATTTTATTCGTTCTTGCCGCAGGCTACTTGCCATTCAACGACCCAAACCTGATGGTGATGTACAGAAAAGTTTATAAAGGACAATTTCGGTGTCCACGTTGGATGTCGCCGGAGCTTCGACGGTTCCTATCGAAGCTTCTAGATGTTAACCCAGAAACTCGAATAACTGTCGAAGCCATGACCCAGGACTCGTGGTTCAGAAAGGGATATAAAGAAATTAAATTTCATGAGGAGGATTATGGGCCTGGGCTTGGGCTTGGGCCCAATAATAAGGTGGTGGATTTGAATGCATTTGATATAATATCGTTTTCTTCGGGGTTGGATTTGTCTGGGTTGTTTGGTGATGTTTTTGCTGGTGCAGGAGGGGAGTGGGTGGTGGTGAAAGGGTCACCGGAGGAGGTGGTGGAGGCGGCGGAGGAGGTTGGGGTGGCGGAGGGGATGGCGGTGAGGTGGAGGAAGGAGGGTGGGGTGGAATTGGAAGGGTGGAGAGAGGATCTAGGGATTGGGGTGGAGGTTTATCGGCTACCGGCGGAGATGGTTTTAGTTGAGGTGAGAAGGAGGGGCGGCGATGATGTGGCATTTAGGGAGCTTTGGGAGAAAAAACTGAAGCCTAGATTCTTGTTGTTAAGATGCGGTTCTGATGTTGCAACGACACCGTCTAATGGGGAACCGGAGTCTTCGGTTGCCAGGGACTAA 1326 0.5302 MPEIEDHTPPSPTEQTALFGKYELGRLLGCGAFAKVYHARNLERGQSVAVKIISKKKIEGTELAGNVKREISIMSMLHHPHIVRLHEVLATKTKIFFVMEFVKGGELFGRIAKGRFSEDLSRRYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGDLKVSDFGLSAVRDQIHPDGLLHTLCGTPAYVAPEVLAKRGYDGAKVDVWSCGVILFVLAAGYLPFNDPNLMVMYRKVYKGQFRCPRWMSPELRRFLSKLLDVNPETRITVEAMTQDSWFRKGYKEIKFHEEDYGPGLGLGPNNKVVDLNAFDIISFSSGLDLSGLFGDVFAGAGGEWVVVKGSPEEVVEAAEEVGVAEGMAVRWRKEGGVELEGWREDLGIGVEVYRLPAEMVLVEVRRRGGDDVAFRELWEKKLKPRFLLLRCGSDVATTPSNGEPESSVARD* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0424 441 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Dod05g0424 441 Gene3D Kinase associated domain 1, KA1 301 419 - -
Dod05g0424 441 PANTHER - 1 423 - -
Dod05g0424 441 Pfam NAF domain 305 360 IPR004041 GO:0007165
Dod05g0424 441 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 423 - -
Dod05g0424 441 Gene3D Transferase(Phosphotransferase) domain 1 12 292 - -
Dod05g0424 441 CDD CIPK_C 306 414 - -
Dod05g0424 441 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0424 441 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0424 441 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Dod05g0424 441 SUPERFAMILY Protein kinase-like (PK-like) 19 285 IPR011009 -
Dod05g0424 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Dod05g0424 441 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0424 Dod-Chr5 5925039 5929022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0424 1 428 CBL-interacting serine-threonine protein kinases AT2G30360 61.290 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dod05g0424 Pkinase 1.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0424 - K12761 gsj:114377188 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0424 05 5925039 5929022 Dod05g0424 05 5925039 5929022 ECH