Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0422 ATGGGTAACAACAGGTTCAAATTATCAGATATGATACCAAATGCTTGGTTTTACAAGCTTAGAGATATGAGCAGATCAAGGAAGAGAAATGGCTCTCATGTTATGAAGAACAAAGTAACCTCACCGACAACATCTCAAAGGTCTCAGCAAAGACACTCTCATTATTTCTCCATTGAACCAGACAAACCTGGTAAGTACTACTACTCTCCTATTTACACCAAACACACAAACATTCTTTTCAGTGATTCACCGAGAAGGTCATCCAAGAGAAGGGCTAGGAGAAAAACAATTTATAAGCCTTCTCCCACAGTTGTCTCATCTCCTGTGTTAGAAAGCTGGAGCTGTCACTCCACAAATAATTGGACTAAGCCAAATCATGTTCAGTCTCCAGAATCTTATGTCTCATCCATAGAGAGTTCTTCTGAGTCAAGTCACAATGAGTATGTTTCATCTGAGTCTGAGTGTGACAATAAGTTTGTTGTTCCTGACATGCTTAATGGGCTAGCTTCTGAGTGTAGCTGTAGAGTTAGCTCTTCAACTAATGACATCATCATTGACATGAATAATGAATCCTTCACGGGAAAAACTGAAAATCTAGATGGGTTTGGCGTAATTTCACAGTTAGGCCTTGCTCCAATATTGACAAAGCCAGTGAAGTTTGATGATAAGCTCATTGAGGCCCTTGAGTTGAGAAATTCAACTAAGTTGGATGGGCTACAAGATCATCACTCTCTACCTGTCAAAATTTGCAAGGAGGAAAGAAGTATGACTCAGAGAGAGCGAAAAACCAGTTCTATAGCTCGAAAGTCCTCTGCTAATTCTACAGGGATAAAACTTAGAGTCAATTCTCCCAAACTTGCAAGCAGGAAAGTTCAAGCCTATGCAAGAAGGAGTGGGTCATCCAGTGCATGCAAAGCCTCAAAAAGTGCAGGTTTTCCAGAGGGATTTGCTGTTGTTAAGTCCTCAGTTGATCCGCAAAAAGACTTCAGGGAGTCAATGGTGGAGATGATCAAGGAGAACAACATCCGGGCATCAAAAGATTTAGAGAACCTACTTGCCTGCTATCTTTCACTGAATTCAAGTGAATACCATGATCTCATTGTGAAAGCATTTGAGCAAATTTGGTATGACATGGCTCAACTTAGACTGTAA 1152 0.4045 MGNNRFKLSDMIPNAWFYKLRDMSRSRKRNGSHVMKNKVTSPTTSQRSQQRHSHYFSIEPDKPGKYYYSPIYTKHTNILFSDSPRRSSKRRARRKTIYKPSPTVVSSPVLESWSCHSTNNWTKPNHVQSPESYVSSIESSSESSHNEYVSSESECDNKFVVPDMLNGLASECSCRVSSSTNDIIIDMNNESFTGKTENLDGFGVISQLGLAPILTKPVKFDDKLIEALELRNSTKLDGLQDHHSLPVKICKEERSMTQRERKTSSIARKSSANSTGIKLRVNSPKLASRKVQAYARRSGSSSACKASKSAGFPEGFAVVKSSVDPQKDFRESMVEMIKENNIRASKDLENLLACYLSLNSSEYHDLIVKAFEQIWYDMAQLRL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0422 383 MobiDBLite consensus disorder prediction 35 53 - -
Dod05g0422 383 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 382 - -
Dod05g0422 383 ProSiteProfiles OVATE domain profile. 318 377 IPR006458 -
Dod05g0422 383 Pfam DNA-binding domain 1 48 IPR025830 GO:0003677
Dod05g0422 383 MobiDBLite consensus disorder prediction 27 53 - -
Dod05g0422 383 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 316 378 IPR006458 -
Dod05g0422 383 Pfam Transcriptional repressor, ovate 322 378 IPR006458 -
Dod05g0422 383 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 382 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0422 Dod-Chr5 5901980 5903645 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod05g0422 Ovate 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0422 - - gmx:100798120 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0422 05 5901980 5903645 Dod05g0422 05 5901980 5903645 ECH
Dod05g0422 05 5901980 5903645 Dod08g0938 08 11507234 11508854 PCT