Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0421 ATGTATTCCAAGAAAGAAAGCATGGAGGAGCATCGTTACATAGAAACAGACCCAACTGGTCGGTATGGCAGGGCTGGAGAAATTCTTGGAAAAGGAGCAATGAAGAAAGTGTACAAAGCAATCGATGCAATCCTTGGAATAGAGGTAGCATGGAACCGGGTCAGACTCAATGAGGCACTTCGCACACCAGATGACTTGGAGAGGCTCTACTTAGAGGTTCATCTCCTCAGCACCCTCAAGCACGAATCAATAATGCAGTTCTATACCTCTTGGATTGATGTTCAGAACAAGACCTTCAACTTCATTACAGAAATGTTCACTTCAGGGACACTAAGAGAATACAGGAAGAAATATAAGGAAGTTGGCATACAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAGGGTCTTGTGTATCTACATGAACATGATCCTCCAGTAATCCATAGGGACCTCAAATGTGATAACATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGGGACCTGGGTCTAGCAGCAGTTCTCCGTAGCTCCCAGCCAGCCCACAGTGTTATAGGCACCCCGGAGTTCATGGCACCAGAATTGTATGAAGAAGAATATAATGAACTTGTTGATGTGTACTCATTTGGCATGTGCGTTTTGGAAATGCTTACATCTGACTATCCATATAGTGAATGTGCTAATCCTGCACAGATATATAAGAAAGTGACATCGGGGAAGCTGCCAGCAGCATTTTTCCAGCTCAAAAACACAGAAGCACAGAAATTTATTGGCAAATGCCTAGTAGCTGCAGCAAAGAGACCATCAGCAAAAGAGTTGTTGCATGATCCATTCCTTGTGTCTGATGATGCATCATCAATGACAATGATTGGAATTCAGAAGCCATTTTTAAATTACAATGAAATGGAGAAACTTCAATTCAGTGGCAATTTACCTAGGACTGAGATGTCAATAACTGGGAAACTGAACTCTGAAGATGATACAATCTTTCTCAAAGTGCAAATTTCTGATGATGGTTCTAGCAGGAATATTTACTTTCCCTTTGACATTTTGAATGACACCCCCATTGATGTTGCAATGGAGATGGTGAAGGAATTGGAGATCACAGATTGGGAGCCTTCTGAAATTGCAAATATGATTGAAGGAGAGATATCTGAGCTGATTCCAAATAGGAGAAAAAGTAACTCTTCAGACACCTGCCATACATTTAGTTATCAAGATGATGATGATGAACAGCCTCATCATCATTTCCGATCCAGCTCTTCTTGTTCATCATCCCAAGAATCAATATCAGGTTCAGTGCACAAGGCTGATGAACTATCAAATGGATATTACTGGGTCCATGATGATATGCATGATGATGCCAGTTCGCGATGCTCTTCACAAGGGACATATTCCAACTTGAACTTTTGTCCTGTGGATGACCACGAGTGCAATGTGGATTCTACAAGAAAAGATAGACATCACATCACAAAGAGTCACAAGTGTACAAGGTTTTCCCCTGGGGAAGACCCAATCACTTTCAACCAGTTCACAGTTTTAGCAGGACTACAAGCACCTTCTACAAGTAAAAGCAAGAGAATGATAGACGATTGCAGACTAACAAGGAATAAGTCACTGATTGATATGAGGAGCCAATTACTACACCGACAACTCATCGAGGAGGTAAACAAAAGGCGGTTATTCAAGACAGTTGGAGATGTGGAAAGTATTGGATTTCAACCACCTTGCGAGATTTCCAGAAGAAAGTCACAGCCATATGGTGCTTTAGATGTGAACTCCTCAAGGAGTGGCAAGGAAGAAAACTTAAGAGCTAAAAGAAACTAG 1833 0.4146 MYSKKESMEEHRYIETDPTGRYGRAGEILGKGAMKKVYKAIDAILGIEVAWNRVRLNEALRTPDDLERLYLEVHLLSTLKHESIMQFYTSWIDVQNKTFNFITEMFTSGTLREYRKKYKEVGIQAIKSWARQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAVLRSSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECANPAQIYKKVTSGKLPAAFFQLKNTEAQKFIGKCLVAAAKRPSAKELLHDPFLVSDDASSMTMIGIQKPFLNYNEMEKLQFSGNLPRTEMSITGKLNSEDDTIFLKVQISDDGSSRNIYFPFDILNDTPIDVAMEMVKELEITDWEPSEIANMIEGEISELIPNRRKSNSSDTCHTFSYQDDDDEQPHHHFRSSSSCSSSQESISGSVHKADELSNGYYWVHDDMHDDASSRCSSQGTYSNLNFCPVDDHECNVDSTRKDRHHITKSHKCTRFSPGEDPITFNQFTVLAGLQAPSTSKSKRMIDDCRLTRNKSLIDMRSQLLHRQLIEEVNKRRLFKTVGDVESIGFQPPCEISRRKSQPYGALDVNSSRSGKEENLRAKRN* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0421 610 Gene3D Transferase(Phosphotransferase) domain 1 106 289 - -
Dod05g0421 610 Gene3D - 317 397 - -
Dod05g0421 610 SMART serkin_6 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0421 610 MobiDBLite consensus disorder prediction 582 610 - -
Dod05g0421 610 Pfam Protein kinase domain 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0421 610 PANTHER WNK KINASE 19 588 - -
Dod05g0421 610 MobiDBLite consensus disorder prediction 420 434 - -
Dod05g0421 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 588 - -
Dod05g0421 610 MobiDBLite consensus disorder prediction 405 419 - -
Dod05g0421 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Dod05g0421 610 ProSiteProfiles Protein kinase domain profile. 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0421 610 Gene3D Phosphorylase Kinase; domain 1 7 104 - -
Dod05g0421 610 SUPERFAMILY Protein kinase-like (PK-like) 25 313 IPR011009 -
Dod05g0421 610 MobiDBLite consensus disorder prediction 391 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0421 Dod-Chr5 5893378 5899414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0421 13 584 MAP Kinase Kinase Kinase AT5G58350 59.138 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod05g0421 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0421 K08867 - gmx:100778102 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0421 05 5893378 5899414 Dod05g0421 05 5893378 5899414 ECH
Dod05g0421 05 5893378 5899414 Dod08g0937 08 11494788 11499580 PCT