Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0412 ATGGCTTTGGCTTCATCTTCTTCCTTTGTCACTTGCGTGTTGTTCCTCCTTTTTCTGCATTTGTCTTCCTTCTTCACTAACCTTAATGCAAAGCATAGTGCTGCCAGTGGTCACAAGCACCAGCACCACCAACACAAGCACCAGCACAGCCAGAATCCCCCATTGAACCCAAGGCTTCACCGCGCTTTTCTTGCGCTCCAAGCATGGAAGCGTGTGATCTACTCCGACCCAAATAACTTCACTACCAATTGGGTAGGTCCTTCAGTTTGTAACTACACTGGTATATATTGTGCTCCATCACAAGACGACCCTAAGGTGACAGTTGTAGCAGGCATTGACCTTAACCATGCAGACTTAGCTGGCTTCCTGCCCAATGAATTAGGCCTGCTCTCAGACCTTGCACTCCTCCATCTCAACAGCAACCGCTTCTGCGGCATCCTCCCAATGACATTGAGCAATCTTACTCTGCTCTATGAGCTTGATCTTAGCAACAACAGATTTGTTGGACCTTTTCCTATGGTTGTGCTTTCCCTTCCTACCCTCAAATATCTTGATATTCGCTTCAACGAATTTGAAGGGCCATTGCCTGCTCAACTTTTCAACAAAACTTTTGATGCCATTTTTGTTAACAACAATCGCTTCACCAACATCATTCCGCGAAATTTAGGCCGTAGCTCAGCTTCGGTCCTGGTCTTTGCTAACAACAAATTTGGAGGCTGTTTGCCAGAAAGCATAGTAAACTTCGCCGACTCACTAGAGGAACTTGTTCTAATCAACACTAGCTTATCTGGTTGTCTGCCACAGCAAGTTGGGTTCCTCTACAAATTGAGACTATTGGATGTGAGTTTCAACCAAATTGTTGGTCCCATACCTTACAGCCTTGCAGGGTTGTCCCATTTGGAGCAGCTAAACTTGGGCCATAATATGATGAGTGGCATAGTCCCTATGGGAGTTTGTGAGTTGCCAAACTTGGCAAATTTCACATTTTCTTATAACTTCTTCTGTGAGGAAGAGGGTATTTGTCAGAATTTGACATCAAAGAGAACGGTGTTTGATGATCGCAGGAACTGTTTGCCGGATAAGCCATTGCAAAGGAGCAAGAAGGAGTGCAATGCTATAAATGAGCACCCGGTTGACTGTGATGAGCTTTGCTGTGCCACAGGTGCTGGTGCTGGGAACAATGTCACTGTTGGTTCAGTGTCTTTCCCACCTGCTGCAACTCCAGCAGCAATGCCTATTTCTGCACCTTTTCTTGCACCAAGCCACCCATGA 1272 0.4591 MALASSSSFVTCVLFLLFLHLSSFFTNLNAKHSAASGHKHQHHQHKHQHSQNPPLNPRLHRAFLALQAWKRVIYSDPNNFTTNWVGPSVCNYTGIYCAPSQDDPKVTVVAGIDLNHADLAGFLPNELGLLSDLALLHLNSNRFCGILPMTLSNLTLLYELDLSNNRFVGPFPMVVLSLPTLKYLDIRFNEFEGPLPAQLFNKTFDAIFVNNNRFTNIIPRNLGRSSASVLVFANNKFGGCLPESIVNFADSLEELVLINTSLSGCLPQQVGFLYKLRLLDVSFNQIVGPIPYSLAGLSHLEQLNLGHNMMSGIVPMGVCELPNLANFTFSYNFFCEEEGICQNLTSKRTVFDDRRNCLPDKPLQRSKKECNAINEHPVDCDELCCATGAGAGNNVTVGSVSFPPAATPAAMPISAPFLAPSHP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0412 423 PANTHER EXTENSIN-LIKE PROTEIN 2 422 - -
Dod05g0412 423 MobiDBLite consensus disorder prediction 35 49 - -
Dod05g0412 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 422 - -
Dod05g0412 423 SUPERFAMILY L domain-like 63 361 - -
Dod05g0412 423 MobiDBLite consensus disorder prediction 35 55 - -
Dod05g0412 423 Gene3D Ribonuclease Inhibitor 63 226 IPR032675 -
Dod05g0412 423 Gene3D Ribonuclease Inhibitor 227 374 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0412 Dod-Chr5 5753876 5755322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0412 56 386 Leucine-rich Repeat extension Gene Families AT3G24480 55.723 3.87e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0412 - - gmx:100782629 666.766