Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0408 ATGGCCACAACACACACACAAGATCCACCTTCGAATCCTAACCCTAATAACAATCCCAGTGCCAACGAAAATGCCAATGCTCAATTCCCTCAATCTCCTGCCACGGCGGCGCCGCCATCCTCCGCCGCCGCACCCTCCTCCATCTTCATCAGCGACAGCGGAGGCGGAGGAAGCGGTGGTTCTCAGCACTCGCACCATCGTAGAGCCCACTCGGAGGTCAGTTTCCGTCTGCCGGACGACACGATGGACCTCTCGCCGTCGGATCCGTTCACCGGCGGCTCATCCACCGCCAGCCTCGAGGAGATCGGATCGGAAGATGACCTCTTCTCAACCTACATTGACGTCGAGAAGCTTGGCGCTGGAGGAGGAGGAACCGGAGCTTCAAACGGATCGGATCAGGGCGGCGGTTACACGAACAACGGCGGCGGCGGCGCTGGAACGAGCGGTCACAATGACGGTGAGAAGAGCCCTGGAGGCAGCAGCGGCGGAGCGAGGCCGAGGCACCGGCACAGTAGCTCCGTCGATGGTTCTACGTCGACGAGCTTCGGTGAGATCATGGAGGCGAAGAAAGCCATGCCTCCTGATAAGCTCGCAGAGCTATGGAACATTGATCCGAAGCGTGCCAAGAGAATACTTGCAAATCGGCAATCTGCTGCACGTTCAAAAGAGAGAAAGGCCCGCTATATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACAGAAGCCACAACTCTTTCTGCCCAATTGACACTGTACCAGAGGGACACAACAGGTCTGAGTTCTGAAAATACCGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAGGCACAGCTTCGCGATGCTCTTAATGATGCGTTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACCGGGGAGGTAATGAACACCTCTGAGTCTTTTAATATGGGAATGCACCAGCTGCCATTTGCAGGGTCAACTTTCTTTCCAGTCCAACCACATTCAGGTCCTTCTCGTCACCAGAACATACAGTTGCCTCCATTTGGCCATCACCCCTTATCTAGCATGCCAAGTCATCAACTGCAACAACCAAATTCTCATCAACTCTCAGATATATTGCAAAATGACCAGCTTGGTCGTTTGCAGGGACTCGACATTAGTAGCAAAGGATCAACACTTGTTAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGACAGTAGCACTGCATTTTGA 1218 0.5353 MATTHTQDPPSNPNPNNNPSANENANAQFPQSPATAAPPSSAAAPSSIFISDSGGGGSGGSQHSHHRRAHSEVSFRLPDDTMDLSPSDPFTGGSSTASLEEIGSEDDLFSTYIDVEKLGAGGGGTGASNGSDQGGGYTNNGGGGAGTSGHNDGEKSPGGSSGGARPRHRHSSSVDGSTSTSFGEIMEAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEVMNTSESFNMGMHQLPFAGSTFFPVQPHSGPSRHQNIQLPPFGHHPLSSMPSHQLQQPNSHQLSDILQNDQLGRLQGLDISSKGSTLVKSEGPSLSASDSSTAF* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0408 405 Gene3D - 205 258 - -
Dod05g0408 405 SMART brlzneu 202 266 IPR004827 GO:0003700|GO:0006355
Dod05g0408 405 SUPERFAMILY Leucine zipper domain 206 257 IPR046347 GO:0003700|GO:0006355
Dod05g0408 405 Pfam bZIP transcription factor 206 264 IPR004827 GO:0003700|GO:0006355
Dod05g0408 405 MobiDBLite consensus disorder prediction 385 405 - -
Dod05g0408 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 204 267 IPR004827 GO:0003700|GO:0006355
Dod05g0408 405 MobiDBLite consensus disorder prediction 126 146 - -
Dod05g0408 405 MobiDBLite consensus disorder prediction 1 60 - -
Dod05g0408 405 Coils Coil 222 249 - -
Dod05g0408 405 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 3 402 - -
Dod05g0408 405 CDD bZIP_plant_RF2 207 256 IPR044759 GO:0003700|GO:0006355
Dod05g0408 405 MobiDBLite consensus disorder prediction 87 101 - -
Dod05g0408 405 MobiDBLite consensus disorder prediction 324 362 - -
Dod05g0408 405 MobiDBLite consensus disorder prediction 1 103 - -
Dod05g0408 405 MobiDBLite consensus disorder prediction 117 180 - -
Dod05g0408 405 PANTHER BZIP TRANSCRIPTION FACTOR 3 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0408 Dod-Chr5 5706691 5710106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0408 10 399 bZIP Transcription Factor Family AT2G40620 48.478 4.13e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod05g0408 bZIP_1 4.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0408 - - gmx:100775607 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0408 05 5706691 5710106 Dod05g0408 05 5706691 5710106 ECH
Dod05g0408 05 5706691 5710106 Dod08g0933 08 11436729 11438932 PCT