Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0406 ATGATGGCATTTAAGGCAGTTCTATCCCTTCCCATCAATTTCCCAGGTACCCCATTTTGGAGAGGCCAAAGAGCTAGGGAAAGAATTGCCATCAGCATACTTCCTATTATGAACAAAAGAAGGGAGGAACTTGCACAAGGAGTTCTAAGCTCTAGTAATGATATGCTTTCTTCCCTGCTAGCATTAAGGGATGAAAATGATCAGCCTCTAGCTGATGATCTCATTACTGACAATTTTATTTTTTTATTTGTTGCGAGTTATGACACATCTGCTACCCTTTTGAGCCTGATGATATGGAAGTTGGCTAGAGATCAGGAAGTTTACAAGAAAGTCTTAGAAGAACAAATGGATATTATAAAGCAAAAGGAAGGAGCAGAGGAGAGGTTAACATGGGCAGACATACAAAACATGAGGTACACATGGAGAGTAGCTCAGGAATTGATGAGGATGATCCCTCCTTTGTTTGGGACCTTCAGGAGAGCACTTAAAGATACTAGCTACCAAGGATATGACATACCAAAAGGGTGGCAGGTTTATTGGGCAGCGTGTGGAACACATATGAACAGTGACATATTCGAGAAGCCCCAGGAGTTTGATCCATCTCGTTTTGAAATTCCAAACAAGCCAATCACTCCCTTCACCTACCTTCCATTTGGAGCAGGGCTTCATTATTGCATAGGAAATGAGTTTGCCAGGGTTGAGACTTTGACCACCATACACAACCTTGTAAAGATGTATGAATGGTCTCAAGTATACCCAGACGAAATAATTACTCGTCAACCAATGCCATATCCATCCATGGGTCTCCCAATTAAGATCAAACCAAGAAATAATGTTTCATAA 843 0.4116 MMAFKAVLSLPINFPGTPFWRGQRARERIAISILPIMNKRREELAQGVLSSSNDMLSSLLALRDENDQPLADDLITDNFIFLFVASYDTSATLLSLMIWKLARDQEVYKKVLEEQMDIIKQKEGAEERLTWADIQNMRYTWRVAQELMRMIPPLFGTFRRALKDTSYQGYDIPKGWQVYWAACGTHMNSDIFEKPQEFDPSRFEIPNKPITPFTYLPFGAGLHYCIGNEFARVETLTTIHNLVKMYEWSQVYPDEIITRQPMPYPSMGLPIKIKPRNNVS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0406 280 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 218 227 IPR017972 GO:0005506|GO:0016705
Dod05g0406 280 Pfam Cytochrome P450 14 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PRINTS B-class P450 signature 187 202 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PRINTS B-class P450 signature 159 186 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PRINTS B-class P450 signature 142 153 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PRINTS B-class P450 signature 225 236 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PRINTS B-class P450 signature 216 225 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 SUPERFAMILY Cytochrome P450 6 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 Gene3D Cytochrome P450 1 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PRINTS P450 superfamily signature 142 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PRINTS P450 superfamily signature 85 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PRINTS P450 superfamily signature 225 236 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PRINTS P450 superfamily signature 216 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0406 280 PANTHER CYTOCHROME P450 26 2 274 - -
Dod05g0406 280 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0406 Dod-Chr5 5690213 5691552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0406 5 254 Cytochrome P450 AT5G45340 41.833 5.65e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0406 - - gmx:100790209 476.092