Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0398 ATGGACCTCCTCCTCCTAGAGAAGGCCCTTCTCGCCGTCTTCGTCGCCGCCATCGTCTCCATCGCTGTTTCCAAACTGCGCGGCAAGCGGTTCAAGCTCCCTCCCGGCCCCCTTCCGGTGCCGATCTTCGGCAACTGGCTCCAGGTCGGCGACGACCTCAACCACCGCAACCTCACCGACCTTGCCAAAAAATTCGGCGACATCTTCCTCCTCCGCATGGGACAGCGCAACCTCGTCGTCGTTTCTTCCCCTGAACTCGCCAAAGAGGTCCTCCACACACAGGGCGTCGAGTTCGGCTCCAGAACACGCAACGTCGTCTTCGACATCTTCACCGGAAAAGGTCAGGACATGGTCTTCACCGTCTATGGCGAACACTGGCGCAAGATGCGCCGCATCATGACCGTCCCCTTCTTCACCAACAAGGTGGTGCAGCAGTATCGGTTTGGTTGGGAGGAGGAGGCGGCGCGTGTGGTGGACGACGTGAGGAACAATCCTGACTCCGCGACGCGCGGGATCGTGTTGCGGCGGAGGCTGCAGCTGATGATGTACAACAACATGTACAGGATCATGTTCGATAGAAGGTTCGAGAACGAGGGGGACCCGTTGTTCCAGAAGCTTCGGGCGTTGAATGGGGAGAGGAGCAGGTTGGCGCAGAGTTTTGAGTATAACTACGGGGATTTCATTCCCATTTTGAGGCCTTTCTTGAGAGGGTACCTTAAGATATGTAAGGAGGTTAAGGAGACCAGGTTGAGGATCTTCAAGGACTACTTCGTCGAGGAGAGAAAGAAGCTTGAGAGCACCAAGAGAATGGACAACGAAGGGCTAAAATGCGCCATCGATCACATTTTGGATGCCCAGAAAAAGGGCGAGATCAACGAAGACAACGTACTTTACATTGTTGAGAACATTAACGTTGCTGGTAAGTATTTAATTTCTTCCTTTTTTTCCCGTCTTTTTTGCCTTTTGCAAATATATAGAAATGATCCATGTATATTATTGTGGGATACTTTTTTTTGTCGCCACCAACGCCGTTTGCTGAATCGCTTCATAAAAAATGTTGGCTCAAATAATGTCATTTATTATTTACCGTGA 1092 0.5137 MDLLLLEKALLAVFVAAIVSIAVSKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWEEEAARVVDDVRNNPDSATRGIVLRRRLQLMMYNNMYRIMFDRRFENEGDPLFQKLRALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKETRLRIFKDYFVEERKKLESTKRMDNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAGKYLISSFFSRLFCLLQIYRNDPCILLWDTFFCRHQRRLLNRFIKNVGSNNVIYYLP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0398 363 Pfam Cytochrome P450 34 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0398 363 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 307 - -
Dod05g0398 363 Gene3D Cytochrome P450 27 329 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0398 363 SUPERFAMILY Cytochrome P450 34 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0398 363 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0398 363 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0398 363 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0398 363 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod05g0398 363 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0398 Dod-Chr5 5385779 5388884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0398 1 307 Monolignol Biosynthesis Gene Families AT2G30490 82.410 8.25e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0398 K00487 - cpap:110823746 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0398 05 5385779 5388884 Dod05g0398 05 5385779 5388884 ECH
Dod05g0398 05 5385779 5388884 Dod08g0931 08 11414385 11418967 PCT