Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0394 ATGCCGTGGTATTTCCTAAATGGCAAGCATATTGGTCAATTGGTATTCGGTTTGCTGGAGCTGTACTACAATCCTGCTGATGATTCAGTGGACAATTTGGCTGAGAAGACTGAAAATCTGTCAGTTTCAGAGGGGGTTGAGGGTACATTTACTGGTTTGAAGAAGAAGAAGAAAAAGCCTGTTGAAATCAGTAACTTAAATGACGAGAGTGGAGATGCAAATGAAGACTTGGATGATCATGCTGAAGAAGATGAAGGAGATGCTATTTCCTCGCAGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATGAATATGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAACTTGCTGGAGACCGGCGTAGGACCGTTATGAGGCCCCCACAAGTTCTTCGTGAGGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGCAAAACAATGCATCGACAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCTTTGGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGGCGATATGTCAATGAATATGTCATTTGCCTCGGATGTAAAAGTCCTGACACAATACTTTCTAAGGAGAACCGTCTGTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCTCCGATCAAGGCTGGTTTCGTTGCTCGTGTTGGCCGTAGGAATGCCGGTACATGA 777 0.4453 MPWYFLNGKHIGQLVFGLLELYYNPADDSVDNLAEKTENLSVSEGVEGTFTGLKKKKKKPVEISNLNDESGDANEDLDDHAEEDEGDAISSQPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0394 258 Coils Coil 63 83 - -
Dod05g0394 258 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 103 210 IPR016189 GO:0003743|GO:0006413
Dod05g0394 258 Gene3D - 101 243 - -
Dod05g0394 258 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 24 255 IPR045196 GO:0003743|GO:0006413
Dod05g0394 258 PANTHER BNAA02G05130D PROTEIN 24 255 - -
Dod05g0394 258 MobiDBLite consensus disorder prediction 69 85 - -
Dod05g0394 258 Pfam Domain found in IF2B/IF5 127 236 IPR002735 GO:0003743|GO:0006413
Dod05g0394 258 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 207 242 IPR016190 GO:0003743|GO:0006413
Dod05g0394 258 MobiDBLite consensus disorder prediction 61 99 - -
Dod05g0394 258 SMART eIF2Bneu4 128 237 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0394 Dod-Chr5 5199075 5202736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0394 34 256 Eukaryotic Initiation Factors Gene Family AT5G20920 81.778 7.87e-129 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0394 K03238 - gmx:100783618 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0394 05 5199075 5202736 Dod05g0394 05 5199075 5202736 ECH