Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod05g0387 | ATGAAGGCAGGCAAAGTTTACTCTCAAATCAATTGTCAATATCCTATACCTTACTGCAAACACCTCTCCATGAAGCTCATTTCTGCTTCATTGACTTCTTTCCTGTTTATCCTGGTTATTCTTTTTCCTCTGTCTGTTGCTGATCTAAGTTCAGACAAGCAAGCTCTTCTTGATTTTGCCAATGCTGTCCCTCACCGCCGGAACCTTATGTGGAATCCAGCCACTTCAGTCTGCACATCTTGGGTAGGCATCACTTGTGATCAAAATCAAACTCGGGTTGTTCGTGTCCGGCTCCCTGGGGTAGGACTAGTTGGCTCCATTCCAACCAATACACTTGGCAAGCTTGGCGCCGTTAAAGTAATTAGCCTTCGCTCCAATCTGCTCACTGGAGATCTTCCTGCTGACATTGCTTCTCTTCCTTCTCTCCAGTTTCTCTACCTCCAGCATAACAACCTTTCCGGTGACATACCTTCTTCATTGTCACCCCAACTCAATGTACTCGATTTGTCATATAATTCCTTCACTGGAAGCATTCCGAAGACACTACAAAATTTGTCAGAATTGACAAGTTTGAGCCTCCAGAACAACTCCCTGTCTGGGGAGATACCTAATCTCAATGTCACTAACCTCAGGCTTTTGAATTTAAGCTACAACCATTTGAATGGATCTATCCCTGAAGCTCTTCAGATTTTTCCTAACTCCTCTTTTGAAGGGAACTCTCTTTTATGTGGACCACCTTTGAAGCCATGCTCTGGGATTCCACCTGCATCTTCTCCTTCCTTGGCTCCAGCTCCACAATCATCTCCTGGTGGACAAAGCTCGAAAAGTAAACTGAGTAAGATAGCTATCATTGCAATTGCCGTTGGAGGAGCCCTGCTGCTATTTTTTGTTGCTCTTGTTATTGTTCTTTGCTGTATAAAGAAAGAAGATAAAGGAGGGCCTGGTGCAATTAAAGGGAAGGGTCCTATTGGAGGTAGGGGCGAGAAGCCAAAAGAAGAGTTTGGTAGTGGGGTGCAGGAACCTGAGAAAAACAAGTTGGTTTTCTTCGAGGGCAGCTCTTATAATTTTGATCTTGAGGACTTGCTAAGAGCTTCAGCCGAAGTTCTGGGAAAGGGTAGCTATGGAACCGCATATAAGGCTATCTTGGAGGAGTCAATGACAGTTGTGGTGAAAAGGTTGAAGGAAGTTGTGGTGGGCAAGAGGGACTTTGAACAGCAGATGGAGATTATTGGAAGGGTTGGCCAACACCAAAATGTTGTGCCACTTCGCGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTACATCCCTGGTGGCAACCTATCCTCACTCTTGCATGGCAACAGGTCTGCTGGAAGAACTCCATTAGATTGGGACTCGCGGCTGAAAATATCCCTGGGAACCGCCTAG | 1419 | 0.4489 | MKAGKVYSQINCQYPIPYCKHLSMKLISASLTSFLFILVILFPLSVADLSSDKQALLDFANAVPHRRNLMWNPATSVCTSWVGITCDQNQTRVVRVRLPGVGLVGSIPTNTLGKLGAVKVISLRSNLLTGDLPADIASLPSLQFLYLQHNNLSGDIPSSLSPQLNVLDLSYNSFTGSIPKTLQNLSELTSLSLQNNSLSGEIPNLNVTNLRLLNLSYNHLNGSIPEALQIFPNSSFEGNSLLCGPPLKPCSGIPPASSPSLAPAPQSSPGGQSSKSKLSKIAIIAIAVGGALLLFFVALVIVLCCIKKEDKGGPGAIKGKGPIGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKRDFEQQMEIIGRVGQHQNVVPLRAYYYSKDEKLLVYDYIPGGNLSSLLHGNRSAGRTPLDWDSRLKISLGTA* | 473 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod05g0387 | 472 | ProSiteProfiles | Protein kinase domain profile. | 363 | 472 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod05g0387 | 472 | PANTHER | OS05G0588300 PROTEIN | 16 | 472 | - | - | |
Dod05g0387 | 472 | MobiDBLite | consensus disorder prediction | 316 | 338 | - | - | |
Dod05g0387 | 472 | Pfam | Leucine rich repeat | 106 | 152 | IPR001611 | GO:0005515 | |
Dod05g0387 | 472 | Gene3D | Ribonuclease Inhibitor | 205 | 251 | IPR032675 | - | |
Dod05g0387 | 472 | Pfam | Leucine Rich Repeat | 164 | 185 | IPR001611 | GO:0005515 | |
Dod05g0387 | 472 | SUPERFAMILY | L domain-like | 51 | 250 | - | - | |
Dod05g0387 | 472 | Gene3D | Ribonuclease Inhibitor | 49 | 204 | IPR032675 | - | |
Dod05g0387 | 472 | SUPERFAMILY | Protein kinase-like (PK-like) | 367 | 471 | IPR011009 | - | |
Dod05g0387 | 472 | ProSitePatterns | Protein kinases ATP-binding region signature. | 369 | 400 | IPR017441 | GO:0005524 | |
Dod05g0387 | 472 | MobiDBLite | consensus disorder prediction | 324 | 338 | - | - | |
Dod05g0387 | 472 | MobiDBLite | consensus disorder prediction | 254 | 274 | - | - | |
Dod05g0387 | 472 | Pfam | Leucine rich repeat N-terminal domain | 50 | 87 | IPR013210 | - | |
Dod05g0387 | 472 | Pfam | Protein tyrosine and serine/threonine kinase | 367 | 452 | IPR001245 | GO:0004672|GO:0006468 | |
Dod05g0387 | 472 | PANTHER | LRR RECEPTOR-LIKE KINASE | 16 | 472 | - | - | |
Dod05g0387 | 472 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 438 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod05g0387 | Dod-Chr5 | 5161683 | 5163286 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod05g0387 | 23 | 472 | Receptor kinase-like Gene Family | AT5G58300 | 63.797 | 0.0 | 553 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Dod05g0387 | PK_Tyr_Ser-Thr | 1.3e-10 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod05g0387 | - | - | gmx:100796171 | 700.664 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod05g0387 | 05 | 5161683 | 5163286 | Dod05g0387 | 05 | 5161683 | 5163286 | ECH |