Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0387 ATGAAGGCAGGCAAAGTTTACTCTCAAATCAATTGTCAATATCCTATACCTTACTGCAAACACCTCTCCATGAAGCTCATTTCTGCTTCATTGACTTCTTTCCTGTTTATCCTGGTTATTCTTTTTCCTCTGTCTGTTGCTGATCTAAGTTCAGACAAGCAAGCTCTTCTTGATTTTGCCAATGCTGTCCCTCACCGCCGGAACCTTATGTGGAATCCAGCCACTTCAGTCTGCACATCTTGGGTAGGCATCACTTGTGATCAAAATCAAACTCGGGTTGTTCGTGTCCGGCTCCCTGGGGTAGGACTAGTTGGCTCCATTCCAACCAATACACTTGGCAAGCTTGGCGCCGTTAAAGTAATTAGCCTTCGCTCCAATCTGCTCACTGGAGATCTTCCTGCTGACATTGCTTCTCTTCCTTCTCTCCAGTTTCTCTACCTCCAGCATAACAACCTTTCCGGTGACATACCTTCTTCATTGTCACCCCAACTCAATGTACTCGATTTGTCATATAATTCCTTCACTGGAAGCATTCCGAAGACACTACAAAATTTGTCAGAATTGACAAGTTTGAGCCTCCAGAACAACTCCCTGTCTGGGGAGATACCTAATCTCAATGTCACTAACCTCAGGCTTTTGAATTTAAGCTACAACCATTTGAATGGATCTATCCCTGAAGCTCTTCAGATTTTTCCTAACTCCTCTTTTGAAGGGAACTCTCTTTTATGTGGACCACCTTTGAAGCCATGCTCTGGGATTCCACCTGCATCTTCTCCTTCCTTGGCTCCAGCTCCACAATCATCTCCTGGTGGACAAAGCTCGAAAAGTAAACTGAGTAAGATAGCTATCATTGCAATTGCCGTTGGAGGAGCCCTGCTGCTATTTTTTGTTGCTCTTGTTATTGTTCTTTGCTGTATAAAGAAAGAAGATAAAGGAGGGCCTGGTGCAATTAAAGGGAAGGGTCCTATTGGAGGTAGGGGCGAGAAGCCAAAAGAAGAGTTTGGTAGTGGGGTGCAGGAACCTGAGAAAAACAAGTTGGTTTTCTTCGAGGGCAGCTCTTATAATTTTGATCTTGAGGACTTGCTAAGAGCTTCAGCCGAAGTTCTGGGAAAGGGTAGCTATGGAACCGCATATAAGGCTATCTTGGAGGAGTCAATGACAGTTGTGGTGAAAAGGTTGAAGGAAGTTGTGGTGGGCAAGAGGGACTTTGAACAGCAGATGGAGATTATTGGAAGGGTTGGCCAACACCAAAATGTTGTGCCACTTCGCGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTACATCCCTGGTGGCAACCTATCCTCACTCTTGCATGGCAACAGGTCTGCTGGAAGAACTCCATTAGATTGGGACTCGCGGCTGAAAATATCCCTGGGAACCGCCTAG 1419 0.4489 MKAGKVYSQINCQYPIPYCKHLSMKLISASLTSFLFILVILFPLSVADLSSDKQALLDFANAVPHRRNLMWNPATSVCTSWVGITCDQNQTRVVRVRLPGVGLVGSIPTNTLGKLGAVKVISLRSNLLTGDLPADIASLPSLQFLYLQHNNLSGDIPSSLSPQLNVLDLSYNSFTGSIPKTLQNLSELTSLSLQNNSLSGEIPNLNVTNLRLLNLSYNHLNGSIPEALQIFPNSSFEGNSLLCGPPLKPCSGIPPASSPSLAPAPQSSPGGQSSKSKLSKIAIIAIAVGGALLLFFVALVIVLCCIKKEDKGGPGAIKGKGPIGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKRDFEQQMEIIGRVGQHQNVVPLRAYYYSKDEKLLVYDYIPGGNLSSLLHGNRSAGRTPLDWDSRLKISLGTA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0387 472 ProSiteProfiles Protein kinase domain profile. 363 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0387 472 PANTHER OS05G0588300 PROTEIN 16 472 - -
Dod05g0387 472 MobiDBLite consensus disorder prediction 316 338 - -
Dod05g0387 472 Pfam Leucine rich repeat 106 152 IPR001611 GO:0005515
Dod05g0387 472 Gene3D Ribonuclease Inhibitor 205 251 IPR032675 -
Dod05g0387 472 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Dod05g0387 472 SUPERFAMILY L domain-like 51 250 - -
Dod05g0387 472 Gene3D Ribonuclease Inhibitor 49 204 IPR032675 -
Dod05g0387 472 SUPERFAMILY Protein kinase-like (PK-like) 367 471 IPR011009 -
Dod05g0387 472 ProSitePatterns Protein kinases ATP-binding region signature. 369 400 IPR017441 GO:0005524
Dod05g0387 472 MobiDBLite consensus disorder prediction 324 338 - -
Dod05g0387 472 MobiDBLite consensus disorder prediction 254 274 - -
Dod05g0387 472 Pfam Leucine rich repeat N-terminal domain 50 87 IPR013210 -
Dod05g0387 472 Pfam Protein tyrosine and serine/threonine kinase 367 452 IPR001245 GO:0004672|GO:0006468
Dod05g0387 472 PANTHER LRR RECEPTOR-LIKE KINASE 16 472 - -
Dod05g0387 472 Gene3D Phosphorylase Kinase; domain 1 331 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0387 Dod-Chr5 5161683 5163286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0387 23 472 Receptor kinase-like Gene Family AT5G58300 63.797 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod05g0387 PK_Tyr_Ser-Thr 1.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0387 - - gmx:100796171 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0387 05 5161683 5163286 Dod05g0387 05 5161683 5163286 ECH