Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0341 ATGAGAAATTACAATACTTCTTTTAACAGCTACATCTTGAGCAGGGCTAGTCCATCTGAGTTCGTCATACCACTTTCAAAATATGTCAAAGCTGTGTACCATACACGTGTTTCTGTTGGTATGCGTTTCCGGATGCTTTTCGAGACTGAAGAGTCAAGTGTTCGCAGGTACATGGGTACAATAACTGGCATAAGTGATATGGACCCTGTTCGGTGGCCGAATTCTCATTGGCGCTCTGTCAAGGTTGGTTGGGATGAGTCAACAGCAGGAGAGAGACAACCACGCGTATCATTATGGGAAATTGAGCCTCTGACTACATTCCCAATGTATCCATCACTATTCCCACTTAGATTTAAACGGCCATGGCATCCTGGTACCTCATCTTTGCATGATGGCAGAGATGAAGCAACTAATGGGCTAATGTGGCTGAGAGGTGGTCCTGGAGAGCAAGGTCTCAATTCCCTCAATTTTCAAGGTGTTGGTATGTTGCCTTGGATGCAGCAGAGAATGGATCCAAGTTTACTAGGAAATGATCAGAATCAACAGTACCAAGCTATGTTGGCAGCTGGTTTGCAGAACCTAGGCAGTGGTTATGTGATGAGGCAGCAAATGATGAATTTTCAACAGCCTTATCAGTACCTTCAACAATCAGGAAACCCTACCTCTCCTTTGCAACTTCAGCAGCAACAGCAAACAATTCAACAATCAGTCTCTTCTAATATGTTGCAGCCACAACAAGGCCAAGTATTGACAGAGAACCTGTCTCAGCACCTCCTTCAGAAACCACCTAACAAGCAAGACGTCCAAGCACAACAGCAGCAACAGAGTTATCAAGATACGCTTTTAATGCAAAGCGATCAGCTACACCAGCGACATCACTCTAGTGCGCCTTCGCCATCATATTCAAAACCAGATTTCTTGGATTCAAGCATAAAGTTCCCTGCATCAGTATCCCCTGGACAAAACATGCTTGGTTCACTTTGTTCAGAAGGAAGCGGAAATCTCTTGAATATGACCAGAAGCAATCAATCCTTACTGACTGAACAGTTACCCCAACAACCATGGACACAAAAGTATGCACCTATACAGGTCAATGCCTTTGGCAGCGCAATATCACATGCACAATATTCTGGAAAAGATTCTCCAATGGTGTCACCGCATTGTAATTCTGATACCCAAAATTCTACTCTCTTTGGTGTCAATATCGATTCATCTGGCCTTCTACTCCCCACCACTGTCCCCGGTTATGCTACTTCATCTGCTGATACTGATGCATCAACAATGCCGCTGGGGGAGACTGGATTCCAGGCTCCCTTATATGCTTGCTTACAAGATTCATCAGAGTTGTTGCCTAGTGGAGGGCAAGTTGACCCACAAAACCAGACTCAAACATTTGTCAAGGTTTACAAATCGGGGTCAGTTGGGCGCTCACTTGACATCTCGCGGTTCAGCAGCTATCATGAACTGCGGGAGGAATTGGCTCAGATGTTTGGAATTGAGGGAAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTGTTCGTCGACAGGGAGAATGATGTTCTTCTCCTTGGAGACGATCCATGGGAATCATTTGTTAATAATGTTTGGTACATCAAAATACTTTCTCCTGAAGATATTCAGAAAATGGGAGAACAAGCAGTAGAATCCCTTGCTCCAAGTTCAGGACAAAGGATGAATGGCAGTGGTGCAGAATCTCATGACATTGTTTCTGGACCACCATCAATTGGCTCACTTGAATACTGA 1770 0.4458 MRNYNTSFNSYILSRASPSEFVIPLSKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRFKRPWHPGTSSLHDGRDEATNGLMWLRGGPGEQGLNSLNFQGVGMLPWMQQRMDPSLLGNDQNQQYQAMLAAGLQNLGSGYVMRQQMMNFQQPYQYLQQSGNPTSPLQLQQQQQTIQQSVSSNMLQPQQGQVLTENLSQHLLQKPPNKQDVQAQQQQQSYQDTLLMQSDQLHQRHHSSAPSPSYSKPDFLDSSIKFPASVSPGQNMLGSLCSEGSGNLLNMTRSNQSLLTEQLPQQPWTQKYAPIQVNAFGSAISHAQYSGKDSPMVSPHCNSDTQNSTLFGVNIDSSGLLLPTTVPGYATSSADTDASTMPLGETGFQAPLYACLQDSSELLPSGGQVDPQNQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEQAVESLAPSSGQRMNGSGAESHDIVSGPPSIGSLEY* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0341 589 MobiDBLite consensus disorder prediction 286 305 - -
Dod05g0341 589 Pfam Auxin response factor 5 81 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Dod05g0341 589 ProSiteProfiles PB1 domain profile. 463 547 IPR000270 GO:0005515
Dod05g0341 589 SUPERFAMILY CAD & PB1 domains 457 537 - -
Dod05g0341 589 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 5 574 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dod05g0341 589 PANTHER AUXIN RESPONSE FACTOR 5 574 - -
Dod05g0341 589 Gene3D - 459 552 - -
Dod05g0341 589 Gene3D - 36 108 - -
Dod05g0341 589 Pfam AUX/IAA family 460 547 IPR033389 -
Dod05g0341 589 MobiDBLite consensus disorder prediction 559 589 - -
Dod05g0341 589 MobiDBLite consensus disorder prediction 286 307 - -
Dod05g0341 589 MobiDBLite consensus disorder prediction 214 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0341 Dod-Chr5 4395529 4400705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0341 5 555 B3 DNA Binding Superfamily AT5G37020 61.319 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0341 - - gmx:100784373 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0341 05 4395529 4400705 Dod08g0894 08 10911872 10916264 PCT