Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0339 ATGAAGCTTTCAACATCAGGGTTGGGTCAGCACGGACAAGAAGGGGGGGAGAAGAAGTGCTTGAATTCTGAGCTATGGCATGCATGTGCTGGACCACTAGTGTCCCTACCAACTGCGGGGACTCGTGTGGTTTACTTCCCTCAGGGTCACAGTGAGCAGGTTGCTGCCACAACTAACAGAGAAGTTGATGGGCACATACCAAATTATCCCAGCTTGCCACCTCAGTTGATTTGCCAACTTCACAATGTCACAATGCATGCCGATGTGGAGACAGATGAAGTATATGCTCAAATGACACTGCAGCCATTGAGTCCCGAGCAGAAGGATACATTTCTTCCTATGGAATTGGGGATTCCAAGTAAGCAGCCATCAAATTATTTTTGCAAGACGTTGACTGCCAGTGACACAAGCACACATGGAGGGTTTTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCTCCACTGGATTTCTCGCAGCAACCACCAGCACAAGAACTGATTGCTAAGGATCTCCATGACTGTTGA 528 0.483 MKLSTSGLGQHGQEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDC* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0339 175 Gene3D - 125 175 IPR015300 -
Dod05g0339 175 PANTHER AUXIN RESPONSE FACTOR 8 1 174 - -
Dod05g0339 175 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 174 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dod05g0339 175 SUPERFAMILY DNA-binding pseudobarrel domain 111 174 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0339 Dod-Chr5 4390027 4392025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0339 1 174 B3 DNA Binding Superfamily AT1G30330 81.818 4.79e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0339 - - gmx:100784373 351.288