Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0333 ATGGGAATGATTAGGGGTTGCAGGTGGTGGCTATGGGTAGGCTGGAGTGAAGGTTGGTGGCAAGTGGCAGCTATGAGTGCCAGAGCACCACTGATCAAGGTTAGACCACCATTGCTTGATGCTGGATCACCTCCAATCAGCGATGAACTACTGCTAATTGGCAGTGACCGATCACCGCTGACTGATAGTGGACCACTTCGCTCTTGGTCGAACCATCGCCGATCGAGATTGGATGACCACCACTGCCGACTGGCACCATTTTGTCATGATTATTTTTGTAAAAATATATCTCATTCCCGAGGTTCAAGCAAGAAGTGGGAGATTGTAGGCGGTGTTGTTGGAGGTGTAGTTCTTGTTATGATTCTTCTTGCATTGTTTGTTTGGCAGAGACAATCCAGGCAACCCATGAGGATTACCAGAGGTAATATATTGGGAGCAACTGAGTTGAAGGGTCCAGCTAACTACAAGTATAATGATTTGAAAGCTGCAACAAGAAATTTCAGTGAAGAAAATAAACTGGGTCAAGGGGGCTTTGGCAGTGTATACAAGAAGCCTTCTACAAAAAGTTCTAAGTGGTCTCATATGGTTTATTTCCTGGGGTATACAGCACCTGAATATGCAATCCATGGTCAATTATCAGAGAAAGCTGATACGTATAGCTATGGAATTGTAGTCCTAGAAATCATAAGTGGTCAAAAGAGTACAGAATTGAAGGTTGATGACAATGGTTATGAATGCCTTCTTCAACGAGCATGGAAATTGCATGAGCAAGGCATGGACATGGAGTTGGTAGACAAAAGCTTAGACCCGAATGACTATGATGAAGCAGAAGTGAAGAAAATCACAGGAATTGGTTTGCTTTGCACTCAATCATCAGCTGCAAGTAGGCCAACAATGTCTGAAGTA 906 0.4371 MGMIRGCRWWLWVGWSEGWWQVAAMSARAPLIKVRPPLLDAGSPPISDELLLIGSDRSPLTDSGPLRSWSNHRRSRLDDHHCRLAPFCHDYFCKNISHSRGSSKKWEIVGGVVGGVVLVMILLALFVWQRQSRQPMRITRGNILGATELKGPANYKYNDLKAATRNFSEENKLGQGGFGSVYKKPSTKSSKWSHMVYFLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTELKVDDNGYECLLQRAWKLHEQGMDMELVDKSLDPNDYDEAEVKKITGIGLLCTQSSAASRPTMSEV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0333 302 Gene3D Phosphorylase Kinase; domain 1 131 188 - -
Dod05g0333 302 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 99 184 - -
Dod05g0333 302 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 194 302 - -
Dod05g0333 302 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 99 184 - -
Dod05g0333 302 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 194 302 - -
Dod05g0333 302 Pfam Protein tyrosine and serine/threonine kinase 199 301 IPR001245 GO:0004672|GO:0006468
Dod05g0333 302 Gene3D Transferase(Phosphotransferase) domain 1 189 302 - -
Dod05g0333 302 SUPERFAMILY Protein kinase-like (PK-like) 191 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0333 Dod-Chr5 4317315 4327110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0333 157 302 Receptor kinase-like Gene Family AT1G56120 41.216 9.47e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod05g0333 PK_Tyr_Ser-Thr 3.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0333 - - gmx:100816764 170.629