Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0332 ATGTTGAGCCTTAAGCTAGTGGCCTTGACCCTGATATGGCGGTGGGCGTGGTATCATCACCACCATGGTTCAGTTGTTGCAGAGCCGGAGACACTTCTACTGAATCCACGGTGCAGCCCACTCAAAGCAACCAACTCGAGCAATTTCTTGTCCAACATCAATGGGATGTTCTCAGAGCTGAGAGCAGATATTAGCAATCAGAGCAATAATCACTTTGGCACAGCACAGAGAGACATAGGAGATCAGACAATAGTGTATGCTATGTTTCAGTGCAGGAAATATCTCTCCAAAAAGGACTGTCTTTCTTGCTTCGACACTGCCAGCGCCCAAATCCGCAACTGTTCTGACGCCGGCGGTGCCAGAGTCATCTATGAAGGGTGCTTCCTCAGGTACGAGACCAATATTCTTTTCTTCAGTGAGACTGCGGAACCAAGCAATGCCGGCATAGTGTGTGGGAACAAGACTGCAAACGAAGCCACTGCTTTTGATGCAGCTGGAAAACAAGCGCTGATGTATCTCCAAAATGAAACACCAAAAACCAAAGGCTTTTTTGCTGCTACTAAGACACAACTAGTGGGTGGGGGCGCAATTTATGCAATTGCACAATGTGTTGAAACTACATATGAGAGCAATTGCTTAAATTGCTTGACAGTTGGATCCACAAACTTGCAGAATTGCCTTCCCAGAGCAGATGGTAGCGAATATGATGCAGGATGTTTTATGAGATATTCGCAGACTCCCTTCCTCGCTGATTATAACCAGACCATTGATCTCACACCACGCTCAACACAAGGAGGTTCAAGCAAGAAGTGGGACATTATCGTAGGTGGCGGTGCTGGAGGTGTAGGTCTTGTTATCATCCTTCTTGCATTGTTTGTTTGGTATAGACGATCCAAGCAACCCAAGAGGATTACCAGAGATAATATATTGGGAGTAACTGAGTTGAAGGGTCCAGTTGATTACAAGTATAATGATTTGAAAGCTGCAACAAAAAATTTCAGTGAAGAAAATAAACTAGGACAAGGGGGCTTTGGCAGTGTATACAAGGGTAATCTGAAAAATGGAAAAATTGTTGCAGTCAAAAAATTGATTCTAGGTAAATCCAGCAAGATGGAGGAAAACTTTGAAAGTGAAGTAAAGCTTATAAGTAATGTGCATCATCGAAATCTGGTTAGACTTCTTGGTTGCTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAGTATATGGCAAACAAAAGCCTTGACAGATTCTTGTTTGAAGGAAAGTGGGAGAAAGGTGCAGCACAAGGCAATAGAGGACTGAGCGAGGGGCCTGGGCTTGTGCAATACACCATGGTGGAACCCGACGCCGTTGCTGCCTCTGCAAGGAGTTCCATCGTGGTCACCTCCTCCTCTGCGCAAGGGAGCTGCACAATCGCCATATCCATTGCTTGTAGAGCTTGA 1446 0.4516 MLSLKLVALTLIWRWAWYHHHHGSVVAEPETLLLNPRCSPLKATNSSNFLSNINGMFSELRADISNQSNNHFGTAQRDIGDQTIVYAMFQCRKYLSKKDCLSCFDTASAQIRNCSDAGGARVIYEGCFLRYETNILFFSETAEPSNAGIVCGNKTANEATAFDAAGKQALMYLQNETPKTKGFFAATKTQLVGGGAIYAIAQCVETTYESNCLNCLTVGSTNLQNCLPRADGSEYDAGCFMRYSQTPFLADYNQTIDLTPRSTQGGSSKKWDIIVGGGAGGVGLVIILLALFVWYRRSKQPKRITRDNILGVTELKGPVDYKYNDLKAATKNFSEENKLGQGGFGSVYKGNLKNGKIVAVKKLILGKSSKMEENFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANKSLDRFLFEGKWEKGAAQGNRGLSEGPGLVQYTMVEPDAVAASARSSIVVTSSSAQGSCTIAISIACRA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0332 481 Pfam Protein tyrosine and serine/threonine kinase 336 422 IPR001245 GO:0004672|GO:0006468
Dod05g0332 481 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 22 423 - -
Dod05g0332 481 SUPERFAMILY Protein kinase-like (PK-like) 309 424 IPR011009 -
Dod05g0332 481 Gene3D Phosphorylase Kinase; domain 1 296 409 - -
Dod05g0332 481 ProSiteProfiles Gnk2-homologous domain profile. 144 248 IPR002902 -
Dod05g0332 481 SMART tyrkin_6 333 481 IPR020635 GO:0004713|GO:0006468
Dod05g0332 481 ProSiteProfiles Protein kinase domain profile. 333 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0332 481 ProSiteProfiles Gnk2-homologous domain profile. 31 136 IPR002902 -
Dod05g0332 481 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 423 - -
Dod05g0332 481 Pfam Salt stress response/antifungal 151 245 IPR002902 -
Dod05g0332 481 Pfam Salt stress response/antifungal 42 133 IPR002902 -
Dod05g0332 481 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Dod05g0332 481 Gene3D - 31 134 IPR038408 -
Dod05g0332 481 Gene3D - 146 248 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0332 Dod-Chr5 4163309 4171588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0332 75 426 Receptor kinase-like Gene Family AT5G40380 33.884 1.10e-54 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod05g0332 PK_Tyr_Ser-Thr 4.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0332 - - ahf:112794879 565.844