Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0331 ATGTCGAACCTTAAGCTAGTGGCCTTGACCCTGATGTGGTGGTGGGCATGGTACCACCAAGGTGCAGTAGTTGTTGTTGCAGACCCAGAGACAGTTCTACTGAATCAAGGGTGCAGCCCAGTGAACGCAACCAACCCGCGCAACTTCTTGGCGAACATCAATGGGATGTTTTCAGAGCTGAGAGCAGAGATTAGCAATCAGAGCAAGTACTTTGGCACAGCACAGAGAGACATAGGAGATCAGACAATAGCGTATGCTTTGTTTCAGTGCAGGAACTACCTCTCCGAAAAGGACTGTCTTTCTTGCTTCGACACTGCCACCACCCAAATCCGCAACTGTTCCGATGCCAGTGGTGCCAGAGTACACTATGAAGGGTGCTTCCTCAGGTACGAGACAAACGTATTTTTCTTCCGTCAGACCGCAGTAGTAGGCGATGACGGCGTATCATGTGGGAACAAGACTGCAAATGATGCCACTGTTTTTGATGCAACTGCAAAACAAGCGCTGATAGATCTCCGAACGGCAACACCGAGAATCAAAGGCTTTTATGCAGCTGCAAAGACACAAGAGGGAGGAGGAGGGGGTGCAATTTATGCATTTGCACAATGTGTTGAAAATGCCACTGAGAGCAGTTGTTTGGATTGCTTGACAGTAGGATCCATAAACTTGCAGAGTTGCTTTCCCAATACTGATGGTACGCTTCCCAGCACAGATGGTACGGCATTTGATGCAGGATGCTTTATAAGATACTCGCAGACACCCTTCTTCGCTGATAACCGGACTATTGATCTCACACCATATTTAGCTCCAGGAGGTTCAAGCAAGAGGTGGGTCATTGTAGGTGGTGGTGGTGCTGGAGGTGTGGGTCTTGTTATGATTCTTCTTGCATTATTTGTTTGGTACAGACGATCCAAACAACTCAAGAGGTTTACCGGAGGTGATATATTGGGAGCAACCGACTTGAAGGGTCCAGTTAGTTACAAGTATAATGATTTGAAAGATGCAACAAAAAATTTCAGTGAAGAAAATAAACTAGGACAAGGGGGGTTTGGCAACGTATACAAGGGTACTTTGAAAAATGGAAAAATTGTTGCAGTCAAGAAATTGATTCTAGGTCAATCTAACAAGATGGAAGATAACTTCGAAAGCGAAGTAAAGCTTATAAGTAATGTGCATCATCGAAATCTGGTTAGACTTCTTGGTTGTTGCAGTAAAGGTCCAGAGAGAATCCTTGTTTATGAATACATGGCAAAAAATAGCCTTGATAGATTCTTGTTTGTAGGTAATAGAAAAGGCTCGCTCAACTGGAAACAACGTTGTGATATAATTTTGGGCACAGCAAAGGGACTGGCCTATCTACATGAGGAATTCCATGTTTCTATCATACATAGAGATATAAAAACCGGCAATATCCTCTTGGATGATGAACTTCAACCCAAAATTGCTGATTTTGGGTTGGCACGGCTTTTACCGCGAGATCAATCTCATCTAAGCACAAGATTTGCAGGAACATTGGGATATACAGCACCTGAATATGCAATTCACGGTCAATTATCAGAGAAAGCTGATACATACAGTTATGGTATTGTAGTCCTAGAAATCATAAGTGGTCAAAAAAGTACAGAAATGAAGGTTGATAACAATGGTCATCAATTCCTTCTTCAACGAGCGTGGACATTGCATGAGCAAGGCATGGACATGGAGTTGGTGGACAAAAGCTTAGACCCTAATCAATATGATGCAGAAGAAGTGAAGAAAATCATAGGGATTGGTTTGCTTTGTACTCAAGCATCACCTGCAATGAGGCCAGCAATGTCTGAAGTAATATTCCTACTTAAAGGCAAGAGTTTACTTGAGCACATGCAACCTACAATGCCTGTCTTTGTTGAGTCAAATTTAAATGCTCGAGGAGAGATCTTTGCCTCAACTGGTTCCTCTACAACTGCATCCAATGCAATAGCGTCTAATGCAACTGTCTCCACTTCTATAGTATCAGCTCGATGA 2004 0.4316 MSNLKLVALTLMWWWAWYHQGAVVVVADPETVLLNQGCSPVNATNPRNFLANINGMFSELRAEISNQSKYFGTAQRDIGDQTIAYALFQCRNYLSEKDCLSCFDTATTQIRNCSDASGARVHYEGCFLRYETNVFFFRQTAVVGDDGVSCGNKTANDATVFDATAKQALIDLRTATPRIKGFYAAAKTQEGGGGGAIYAFAQCVENATESSCLDCLTVGSINLQSCFPNTDGTLPSTDGTAFDAGCFIRYSQTPFFADNRTIDLTPYLAPGGSSKRWVIVGGGGAGGVGLVMILLALFVWYRRSKQLKRFTGGDILGATDLKGPVSYKYNDLKDATKNFSEENKLGQGGFGNVYKGTLKNGKIVAVKKLILGQSNKMEDNFESEVKLISNVHHRNLVRLLGCCSKGPERILVYEYMAKNSLDRFLFVGNRKGSLNWKQRCDIILGTAKGLAYLHEEFHVSIIHRDIKTGNILLDDELQPKIADFGLARLLPRDQSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEMKVDNNGHQFLLQRAWTLHEQGMDMELVDKSLDPNQYDAEEVKKIIGIGLLCTQASPAMRPAMSEVIFLLKGKSLLEHMQPTMPVFVESNLNARGEIFASTGSSTTASNAIASNATVSTSIVSAR* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0331 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Dod05g0331 667 Gene3D Transferase(Phosphotransferase) domain 1 416 624 - -
Dod05g0331 667 CDD STKc_IRAK 345 614 - -
Dod05g0331 667 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Dod05g0331 667 Gene3D Phosphorylase Kinase; domain 1 311 415 - -
Dod05g0331 667 Pfam Salt stress response/antifungal 150 252 IPR002902 -
Dod05g0331 667 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Dod05g0331 667 ProSiteProfiles Gnk2-homologous domain profile. 143 255 IPR002902 -
Dod05g0331 667 ProSiteProfiles Protein kinase domain profile. 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0331 667 SMART serkin_6 339 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0331 667 Gene3D - 30 135 IPR038408 -
Dod05g0331 667 Gene3D - 147 255 IPR038408 -
Dod05g0331 667 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 22 655 - -
Dod05g0331 667 SUPERFAMILY Protein kinase-like (PK-like) 323 612 IPR011009 -
Dod05g0331 667 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Dod05g0331 667 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 655 - -
Dod05g0331 667 Pfam Protein kinase domain 340 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0331 Dod-Chr5 4146463 4154966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0331 25 667 Receptor kinase-like Gene Family AT1G70520 37.366 4.61e-124 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod05g0331 Pkinase 4.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0331 - - gmx:100793189 847.04