Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0317 ATGGTGCAACTGAATCAAGGAGATGTGCGAAGATATGTGGGTGTTGCTTCAACAATGATTGGACTTGTGTGCTACGCTCTGAGCTCCTCCTTCAACCGTCTATACGGTGACTGGAACTCGTTCAAGATCTGTGCGTACATCGTGTTCAGTTCCATCATTTGTCTCGCCATCTTGTTCCCAAAGGCGTGTCAAGGCTGGAGGATTTTCGAGTACAGAGCTCTTTTTGCGTTCTTGGTTTTGACCTCCACCACTGTGTACTCCTTCTATTTGGATAGAAAATTGACGACGAAGCCAGACGCATATGGCATCATTTCCTCTGCTGCCTTCGCTACTATGTCTCTCTGCACGTCAAAGAGCATCGACTGCGGATTCCTGGATCTGATGTTTTTCTTCAGTGGAGTTCTTATAACACAGCTCATGGAGATTAAGCCGTTGTTAGGTTTGGTCGGAATAGGTGTCAGTTGTTTCCTCATTATTTTCCGTTCTTATTTAGATGATCCAGTACCAGCAGTAGAATATCTTGGAAGCCAAGATCAGTATTATGAGGTCATTGACATAGCTTCACTACAATCCATATCTAGCCGTGCTAGTTCCCTTGATATCACGCCATGGGCACTAGAAGACAATATTCAAAACTTCGACGCAAACTTTACTGCTCTTGAGATCTTGCCACTGCCGAGCCTGGAGCCGCTGCAACGACTGCAAATCCCGAGCCTGGAGCAGCTGCGACAGCTGAGACTGCTACAGTGGTTGCTGCCGAGCCGCTGCTGTTTATGGTTAGAGAATTCTCATATAAATTGTGCTAGTGGCAAATATGCGATCGCGGTTGCTTCCGAGCTTCTGCAGCAAGTGCCAAACCTGCGACCGCCGAGCCTGAAACTGATGCCGAGGGAAAGTAGTTTGGGGGAAAGTAATCTCGAGGATTCTATTATCGATTTCCTGGCTGTCTCTGCTTTCAATTTCATGATAATTGACGAGCTGAACGGGACAAGGATCCTTTTAAGTGATGATTGGATCCAGAAACGCCGTGAAAGAGTCCCGGAAATCATTGAAAAGCATCAAAGTAACTCGTGGAATCAGGTGCTGGAGCATCTGGTGCCGGACACCGGCAATGAGTCAGAGACGGAGCTGAAAGACACCCTCGAGCTGCTCAACATGCACTTTAAGGACAAGTGCACCGTTCATTTTAAGGGGACTCTCACCCGCAAGCCGTTGAGGTATGTTATGAAGCCATCATTGGAAAACATCTTGTTGCCAATATATGAAAAATTCATCCACAGGCTCCAGAATGTTCTCAGCGAGAGGCGTTATAAGTATATTCATCTTATAGTGAATCTAGCCCTACCTGACCTCGTACATTTATTTCGCGGAACCGGGGAAATAGATCAGCCGCTAACAGAAAAAGGAAATAAGCTGAAACTTGAGTGA 1428 0.4636 MVQLNQGDVRRYVGVASTMIGLVCYALSSSFNRLYGDWNSFKICAYIVFSSIICLAILFPKACQGWRIFEYRALFAFLVLTSTTVYSFYLDRKLTTKPDAYGIISSAAFATMSLCTSKSIDCGFLDLMFFFSGVLITQLMEIKPLLGLVGIGVSCFLIIFRSYLDDPVPAVEYLGSQDQYYEVIDIASLQSISSRASSLDITPWALEDNIQNFDANFTALEILPLPSLEPLQRLQIPSLEQLRQLRLLQWLLPSRCCLWLENSHINCASGKYAIAVASELLQQVPNLRPPSLKLMPRESSLGESNLEDSIIDFLAVSAFNFMIIDELNGTRILLSDDWIQKRRERVPEIIEKHQSNSWNQVLEHLVPDTGNESETELKDTLELLNMHFKDKCTVHFKGTLTRKPLRYVMKPSLENILLPIYEKFIHRLQNVLSERRYKYIHLIVNLALPDLVHLFRGTGEIDQPLTEKGNKLKLE* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0317 475 PANTHER EXOCYST COMPLEX PROTEIN EXO70 326 456 IPR004140 GO:0000145|GO:0006887
Dod05g0317 475 Pfam Exo70 exocyst complex subunit 331 440 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod05g0317 475 SUPERFAMILY Cullin repeat-like 330 440 IPR016159 -
Dod05g0317 475 Gene3D Exocyst complex component Exo70 321 459 - -
Dod05g0317 475 PANTHER PROTEIN, PUTATIVE-RELATED 326 456 - -
Dod05g0317 475 PANTHER PROTEIN, PUTATIVE-RELATED 8 192 - -
Dod05g0317 475 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 192 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0317 Dod-Chr5 3992558 3994518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0317 338 458 EXO70 exocyst subunit family AT5G58430 30.709 1.84e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0317 - - aip:107607041 174.096