Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0313 ATGGGGGTGGAACGGCCTCCTGATGATGGTTACAGTTGGAGAAAATATGGTCAAAAAGACATTCTTGGAGCCAAGTATCCAAGAGGCTATTATAGATGCACCCACAGAAACGTCCAAGGGTGCTTGGCCACAAAGCAAGTGCAAAGATCTGAGGAAGATCCCACTGTCTTCGAAATCACATACATAGGGCGGCACACATGCACAGCGGCATCCTCTTCCAATGCGGTTCCTGCAACAAGTACAAAAGAAAACCAAGATTCCAATCTGAACACAAACCCGCAGCAGCAGAATGTGCCACAAAGCCTGGAGCAGCAACCCATCAATGAGCTGCCTCTGAACCTCCCTGAAGGCCTGAGGGTCCAAACAGAGAACCTAGATGCCCCTGACCAACCACCCTTTGTTGGTTCCTTGTATTTCCCTTCAACTTCAAACATCAACACTGAGAACCAGGTTTTCCCACCCCCTCATCCTGTGCTCCCTGAAAACTTCAATCCTCCTTCATCTCCCCTGCCACCTCAGGAATAA 525 0.4933 MGVERPPDDGYSWRKYGQKDILGAKYPRGYYRCTHRNVQGCLATKQVQRSEEDPTVFEITYIGRHTCTAASSSNAVPATSTKENQDSNLNTNPQQQNVPQSLEQQPINELPLNLPEGLRVQTENLDAPDQPPFVGSLYFPSTSNINTENQVFPPPHPVLPENFNPPSSPLPPQE* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0313 174 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 152 IPR044810 GO:0003700
Dod05g0313 174 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 1 152 - -
Dod05g0313 174 ProSiteProfiles WRKY domain profile. 8 70 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0313 174 SMART WRKY_cls 7 69 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0313 174 MobiDBLite consensus disorder prediction 68 106 - -
Dod05g0313 174 MobiDBLite consensus disorder prediction 136 151 - -
Dod05g0313 174 SUPERFAMILY WRKY DNA-binding domain 6 68 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0313 174 Pfam WRKY DNA -binding domain 8 67 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0313 174 MobiDBLite consensus disorder prediction 124 174 - -
Dod05g0313 174 MobiDBLite consensus disorder prediction 153 174 - -
Dod05g0313 174 Gene3D WRKY domain 2 62 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0313 Dod-Chr5 3930527 3931176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0313 2 133 WRKY Transcription Factor Family AT4G23810 49.640 6.59e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod05g0313 WRKY 1.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0313 - - gmx:100776906 210.305