Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0311 ATGCCAGACCGCAAGAAGAAGAAGAAGGCAGCAATCAAAACCAAGCAGCTATCACTCCAGCCTTTTCATTTGCAGCACTCCCTTCAGCTTCACTACGATCCAGACCTAGCAGAGCTTCACGAAGACCCAAACCTAGCAGAGCTTCACGAAGACCCAAACCTAGCACAGCTTCACGAAGATCCAGATTTGGGGATGCCAGAGCTCTGGATATTCAGAACCAAGCAATCATTGAAGACTACTTACAGTATTCTCGTTTACTTCAGAGTACCCCTGATTATGATAGTACCCGGAATTGACCGCAAGAAGAAGAAGAAGAAGAGAGGAGGAGGAGGAGGAGGAGGCAGTAATCAAAAACCAAGCATGCTATCGCTCCAGTCTATTTATTTGCCGCACTCCGGTTCAGCTTCACTACGACACAGATCTAGCACTAGCAGAGCTTCTTCACTACGAATCAGAACTAGCCGATCAGCTTCGCGAAGATCGAGAACTAGGCGTGCCAGAGCTCTCGATATTCATCAAAACCAACCAATCACTGAAGAAGAAGAAGAAGAAGAAGCCAATTCACATTCAGCAGTTGATGATTTTAGATATTTGATATTCATTACCCCGCTAGTCAACTACCTTTTCTGCCCTGATCTTGGGGTTTGGATGAAACCGAGGACAAGGGTTGTTTTGGGCGGAGACTGGATCCTCACGAACCAAGCAAGAGTCTTGGAAATTTTTCAAGACTGTCAAAGAAGCTCGTGGAATAAGTTGCTGAGTAACTTGCAGAACCGCCGCAATGATGAGTCGCTGATCTGGGATATGATAGACAAGCACAATTTGTTCAGCATGCAATTTAAGGACATGTGCTACCTCCTGTCTAACTGGGTTGTCTCTGATAAGCAGTTAAGGGATAATCTAAAGACATCATGGGAAAACATTTTGTTGCCAACATATGATTACTTCAGGCACAGTAACAGGTTCCTGGCACTTCTCGGTAAGCATGCTCATAATAATTTTGTTAGGTATGAAGTGCCTGACATTCTAGCTGGACTCGGACATTCGTTCTGCGGAAAGAGGGAAATAGATCAGCCATTGGTAGAGATGGGTAAGAAATCGAAGATTGAGTGA 1113 0.4483 MPDRKKKKKAAIKTKQLSLQPFHLQHSLQLHYDPDLAELHEDPNLAELHEDPNLAQLHEDPDLGMPELWIFRTKQSLKTTYSILVYFRVPLIMIVPGIDRKKKKKKRGGGGGGGSNQKPSMLSLQSIYLPHSGSASLRHRSSTSRASSLRIRTSRSASRRSRTRRARALDIHQNQPITEEEEEEEANSHSAVDDFRYLIFITPLVNYLFCPDLGVWMKPRTRVVLGGDWILTNQARVLEIFQDCQRSSWNKLLSNLQNRRNDESLIWDMIDKHNLFSMQFKDMCYLLSNWVVSDKQLRDNLKTSWENILLPTYDYFRHSNRFLALLGKHAHNNFVRYEVPDILAGLGHSFCGKREIDQPLVEMGKKSKIE* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0311 370 PANTHER EXOCYST COMPLEX PROTEIN EXO70 219 349 IPR004140 GO:0000145|GO:0006887
Dod05g0311 370 MobiDBLite consensus disorder prediction 100 121 - -
Dod05g0311 370 Pfam Exo70 exocyst complex subunit 223 318 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod05g0311 370 PANTHER PROTEIN, PUTATIVE-RELATED 219 349 - -
Dod05g0311 370 Gene3D Exocyst complex component Exo70 217 358 - -
Dod05g0311 370 SUPERFAMILY Cullin repeat-like 222 341 IPR016159 -
Dod05g0311 370 MobiDBLite consensus disorder prediction 133 154 - -
Dod05g0311 370 MobiDBLite consensus disorder prediction 133 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0311 Dod-Chr5 3910735 3916551 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0311 199 352 EXO70 exocyst subunit family AT5G58430 30.247 4.31e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0311 K07195 - aprc:113874430 84.7297