Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0308 ATGCAGCAAGATCACAGGAAAAAGAGTTCGACAGAAATGGATTTCTTCTCTGAATATGGCGATGCCAATCGTTACAAAATTCAAGAAGTCATTGGGAAAGGAAGTTATGGCGTTGTCTGTTCTGCCATTGACACCCATACTGGTGAAAAAGTGGCGATTAAGAAAATTCACGACATCTTCGAGCACATATCTGATGCTGCACGCATTCTCCGTGAAATAAAGCTGCTTAGACTTCTTCGACATCCCGATATCGTTGAAATCAAACACATTATGCTTCCTCCTTCTAGGAAGGACTTCAAAGATATTTACGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATTAAAGCCAATGATGACTTGACAAAAGAGCACTATCAGTTTTTCCTTTACCAATTGCTTCGAGCATTGAAGTATATTCACACTGCTAACGTCTATCATCGAGATTTGAAGCCAAAGAATATACTGGCAAATGCAAACTGTAAACTTAAAATATGTGATTTCGGGTTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTCTGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTGCTAACAGGAAAGCCGCTTTTTCCTGGAAAAAATGTTGTCCACCAGTTGGATCTGATGACAGATTTGCTTGGAACTCCCTCACTGGATACCATATCACGGGTACGCAATGAGAAAGCAAGGAGATACCTAACTAGCATGAGGAAAAAGCAGCCTGTGTCGTTTGCTCAAAAGTTTCCTAATGCAGACCCTTTAGCGCTGCGACTACTGGAAAGGTTGCTAGCTTTTGACCCAAAAGACCGACCTACGGCTGAAGAGGCATTGGCTGATCCTTACTTCAAGGGACTGGCTAAAGTAGAGAGGGAACCATCTTGCCAGCCTATCACAAAAATGGAGTTTGAATTTGAAAGGCGAAGAGTCACAAAGGAAGAAATTCGAGAGCTAATCTTCCGTGAGATTCTGGAATATCATCCTCAACTATTGAAAGATTACATGAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAGAAAGCAGTTTGCTTATCTGGAGGAAAATGGCAAAAATGGTCCAGTGATGCCGCTTGATAGAAAGCATGTTTCTCTTCCAAGGTCAACAGTTGTACATTCAAATGCAGCACCCCCTAAAGAACAGACACATATTGCTTCCTCCAAGAACCGGCAAACAGCCGAAGAATATACCAAGAATTCAAGAGATACTGAAATTCCTGTGCCAAGGGCAATGCCAGGACCGCAAAGAGTTCCACTAGCAAAACCTGGTAAGGTTGTTGGGCCAGTCGTTCCGTACGAGTATGGGAGTGTTGTCAAGGATTCTTATGATCCAAGGGCATTCATCAGAGGTTCTGTGCTTCCTTCTCAACCTCTTCCTCCGGCATATTATTATCAAAGATCTAGCGGTGGAAATCAAGAAAGGCCAGCAACAGAAGCTGATAAGGGTGTGCCTTTGCAAGCAAAACATGGCCAGCAATGTGGAGTTAGTGCCAAAATGGCACCAGATGTAGCTATTAATATCGACACAAACCCGTTTTTTATGACGCGCGTGGGAGTGAACAAGGTAGAACAAGGTGATCAAATAGCCATAGAAACAAACTTGCTGCAGTCAAAGGCTCAATATGGTGGGATTAGTCCAGCAGCTGGGGCCACTGCTCATAGAAAGGTTGGTCCTGTTCAGTATGGTATGACAAGGATGTTCTAG 1842 0.4262 MQQDHRKKSSTEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVSFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAYLEENGKNGPVMPLDRKHVSLPRSTVVHSNAAPPKEQTHIASSKNRQTAEEYTKNSRDTEIPVPRAMPGPQRVPLAKPGKVVGPVVPYEYGSVVKDSYDPRAFIRGSVLPSQPLPPAYYYQRSSGGNQERPATEADKGVPLQAKHGQQCGVSAKMAPDVAINIDTNPFFMTRVGVNKVEQGDQIAIETNLLQSKAQYGGISPAAGATAHRKVGPVQYGMTRMF* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0308 613 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Dod05g0308 613 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0308 613 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0308 613 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Dod05g0308 613 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0308 613 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Dod05g0308 613 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dod05g0308 613 MobiDBLite consensus disorder prediction 505 526 - -
Dod05g0308 613 MobiDBLite consensus disorder prediction 417 439 - -
Dod05g0308 613 MobiDBLite consensus disorder prediction 417 465 - -
Dod05g0308 613 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Dod05g0308 613 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Dod05g0308 613 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Dod05g0308 613 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0308 Dod-Chr5 3865709 3873827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0308 1 435 MAP Kinase Gene Family AT2G42880 88.761 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dod05g0308 Pkinase 6.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0308 - - gmx:100811788 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0308 05 3865709 3873827 Dod08g0355 08 3835085 3838490 PCT