Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0304 ATGGTGATTGTCACAGCTTCTTACACTATCATTCCAATTGACTCTACTCCAAAGGGTCTTTTATGGCTCTCCCAGTGTGACCAAGTCCAGCCTTGGACTCATTCTTCCTCCATCTACATTTACAAGGCAAACCACAACAATGGTGCCATTGAGAGAATGAGAGACTCTCTTAGCAATCTTTTGGTGCACTACTATCCCTTAGCCGGGAGATTGAGATGGATAGGAGGTGGAAGGCTAGAATTGGATTGCAATGCAAAGGGAGTGAAGTTGATTGTTGCTGAATCCACAAAAACATTGGCTGAATTTGGTGACTTCACACCCAATGAAACCATAAAGGATCTTATTCCCATGGTTGATTATAATCAACACATAGAAGAGATTCCCTTGATGCTAGTTCAATTGACCAAATTCCATGGCCATGATGATGAAGAAGGACTTGCAATTGGGGTTGCCATGTCACATGCTTTGCTTGATGGTTTGGCTACTATTCACTTCATCAACACATGGGCCAAGATGGCTAGAGGGGACACATTAGATGAGGATGAGATGTCACCATTTTTGGATAGAAAAATACTAAAGTCTCCACACCCTCAATTGCCACCAAGATTTGACCACCTAGAGTTCAAGCCTATGCCACTAATTCTAGGAAGCCAAGATAGCATGGAGGAGCAAAAGAAGGAGACAAGTGTTGCGCTATTGAAACTCACACCAAATCTAGTGGACAAGCTAAAGAAGAAGACCAATGATCAATTAAAGAAAGAAGGGTCATCAAGACCTTACAGTAGATATGAAGCTATTGCTGCTCATATATGGAGATCAGCATCTAAGGCTCGTCAAGGTAGTAGTAATAATGACCATCAAGAAACTATGGTTAGAATTAGTGTTGACATCCGCAAAAAAATAATTCCACAACTACCTAGTAATTATTTTGGAAGTGCTGTGATGCCTATAGTGACATCAAAATGTTACACTAGGGAAATTATGTCCAGCCCTCTGAGCTATGCTGCCCAAAAGATAAGGGAAGCAATTGAGATGTTCACAAATGAGTACATTCAGTCACAACTCGACTTTGTTAGGAGTCAAGAGGAATTAGATTCCATTAGGGCTTCCTACCATGTCCAATTAGATGAACATAGAAATATTGGGCCTTTTTATGGGAATCCAAACCTTAGCATTGTGAGCTGGACCAGCTTGCAAGTGTATGGTGCAGATTTTGGATGGGGGAAGCCTGTGTATTTGGGGCCAGGAGTTGTGAGCACTGATGGTACTGCATACATCATTCAAGGCCCAGAGGGAGATGGCTCTATCACCATAGCTATACGTTTGCAAACAGCTTGTATGACACTTTTCAACCAATTCTTCTATCAGGACATATATACATAG 1383 0.4158 MVIVTASYTIIPIDSTPKGLLWLSQCDQVQPWTHSSSIYIYKANHNNGAIERMRDSLSNLLVHYYPLAGRLRWIGGGRLELDCNAKGVKLIVAESTKTLAEFGDFTPNETIKDLIPMVDYNQHIEEIPLMLVQLTKFHGHDDEEGLAIGVAMSHALLDGLATIHFINTWAKMARGDTLDEDEMSPFLDRKILKSPHPQLPPRFDHLEFKPMPLILGSQDSMEEQKKETSVALLKLTPNLVDKLKKKTNDQLKKEGSSRPYSRYEAIAAHIWRSASKARQGSSNNDHQETMVRISVDIRKKIIPQLPSNYFGSAVMPIVTSKCYTREIMSSPLSYAAQKIREAIEMFTNEYIQSQLDFVRSQEELDSIRASYHVQLDEHRNIGPFYGNPNLSIVSWTSLQVYGADFGWGKPVYLGPGVVSTDGTAYIIQGPEGDGSITIAIRLQTACMTLFNQFFYQDIYT* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0304 460 Pfam Transferase family 2 455 - -
Dod05g0304 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 458 - -
Dod05g0304 460 Gene3D - 1 210 IPR023213 -
Dod05g0304 460 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 3 458 - -
Dod05g0304 460 Gene3D - 216 457 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0304 Dod-Chr5 3838771 3840153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0304 7 456 Monolignol Biosynthesis Gene Families AT5G48930 36.504 5.88e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0304 K13065 - gmx:100787038 529.25