Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0300 ATGGCTTCAAGCTTTGCTTCGAGATATTCTCGTGTGGGTCGATCCCTGCTTGGTGGATTAGGCAACAGCTATACTGGTTTATTTACCACATCACATGAGATGACATGTGGCAATTTCTTTTCTCAGCTGCAGCAGCACCGAACCTTCATACAGATGAGGACTGTTCTCAAGGTTGTGGACAATTCTGGGGCTAAAAAGGTGATGTGCATACAAGCTCTGAAAGGGAAGAAAGGTGCAAGATTAGGTGACACAATAATAGCATCAGTGAAGGAAGCCCATCCTAATGGAAAAGTGAAGAAAGGAAAGGTTGTATACGGGGTAGTCGTGCGCGCAGCAATGCAAAGGGGGCGATGCGATGGCAGCGAGGTCAAGTTTGATGACAACGCTGTGGTGCTTGTTGACAAGCAAGGCCAGCCTATTGGGACCAGAGTTTTTGGACCGGTGCCTCATGAGCTGAGGCAGAAGAAGCATGTCAAGATTCTTACTTTGGCAGGGCATATTGCATAA 507 0.4734 MASSFASRYSRVGRSLLGGLGNSYTGLFTTSHEMTCGNFFSQLQQHRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0300 168 SUPERFAMILY Ribosomal protein L14 50 167 IPR036853 GO:0003735|GO:0005840|GO:0006412
Dod05g0300 168 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 19 168 IPR000218 GO:0003735|GO:0005840|GO:0006412
Dod05g0300 168 TIGRFAM rplN_bact: ribosomal protein uL14 50 167 IPR005745 GO:0003735|GO:0006412|GO:0015934
Dod05g0300 168 PANTHER 50S RIBOSOMAL PROTEIN HLP, MITOCHONDRIAL-LIKE ISOFORM X1 19 168 - -
Dod05g0300 168 SMART Ribosomal_L14_2 49 168 IPR000218 GO:0003735|GO:0005840|GO:0006412
Dod05g0300 168 Gene3D Ribosomal protein L14 49 168 IPR036853 GO:0003735|GO:0005840|GO:0006412
Dod05g0300 168 ProSitePatterns Ribosomal protein L14 signature. 106 132 IPR019972 -
Dod05g0300 168 Pfam Ribosomal protein L14p/L23e 50 167 IPR000218 GO:0003735|GO:0005840|GO:0006412
Dod05g0300 168 Hamap 50S ribosomal protein L14 [rplN]. 49 168 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0300 Dod-Chr5 3762824 3767397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0300 35 151 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 32.258 3.73e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0300 K02874 - gmx:100818301 272.707