Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0289 ATGATTTGCTCCTTGAGAAAACCTGGTGTAGGGATCACCGGTTCTGATGTTGTTTTGAGGAGAAAACATGCAACCCCATTTCAGCCATGTTCTTCGTTCTTACCTTTTTTGCCAAGAGAGAAGGCTCAGAAACACCTTGTTGTTTCATTGCAAAAGCCACTGCACCTTGCTCCGCTTGGTGTCAAGAATTTTGAGTCAGTGAAGGGTCTTGGAGGGAGTGATCTGTTGAGGTGTGGTGCATATGAGGCAGATAGATCAGAGGTTGAGGGTGCAGGAACATCACCTTCTGAGGCTGCAAAGAAGGTGAAGATTGGGATATACTTTGCAACATGGTGGGCGCTGAATGTGGTTTTCAATATATACAACAAGAAGGTGTTGAATGCATACCCTTACCCTTGGCTTACCTCAACACTCTCACTTGCTTGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACAAGGATTGCTGAGGCTCCTAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACACGTGGCAGCTACGGTTAGTATGTCAAAAGTTGCAGTGTCATTTACCCATATTATCAAGAGTGGTGAGCCTGCCTTTAGTGTGCTGGTTTCGCGATTTCTTTTGGGTGAGACCTTCCCTGTGCCAGTCTATCTGTCTTTAATTCCAATCATTGGTGGATGTGCGCTTGCTGCAGTTACTGAACTCAATTTCAATATGATCGGTTTTATGGGGGCTATGATATCAAATCTGGCATTTGTATTCCGGAATATCTTTTCAAAGAGGGGCATGAAGGGAAAATCTGTCAGCGGAATGAATTACTATGCTTGCTTATCTATTTTGTCGCTTGCAATTCTCACGCCATTTGCAATTGCTGTGGAAGGTCCGCAGATGTGGGCAGCTGGATGGCAAACAGCCCTCTCTCAAATAGGACCCCAATTCATATGGTGGGTAGCAGCTCAAAGTGTATTCTACCATCTGTACAATCAGGTGTCATACATGTCTTTGGATGAGATCTCACCCTTGACCTTTAGCATCGGAAACACCATGAAACGAATATCCGTCATTGTGTCTTCAATCATTATCTTCCATACACCAGTTCAACCCATCAATGCTCTTGGAGCTGCTATTGCTATCCTTGGAACCTTCTTATATTCGCAGGTATTCTCTAGCTATCATTTTTATTTATTTTTTTAG 1212 0.4373 MICSLRKPGVGITGSDVVLRRKHATPFQPCSSFLPFLPREKAQKHLVVSLQKPLHLAPLGVKNFESVKGLGGSDLLRCGAYEADRSEVEGAGTSPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQVFSSYHFYLFF* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0289 403 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 52 393 - -
Dod05g0289 403 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 103 394 IPR004696 GO:0016021|GO:0022857|GO:0055085
Dod05g0289 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 238 - -
Dod05g0289 403 PANTHER SOLUTE CARRIER FAMILY 35 52 393 - -
Dod05g0289 403 Pfam Triose-phosphate Transporter family 103 391 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0289 Dod-Chr5 3620339 3624862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0289 1 392 Antiporters AT5G54800 74.314 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0289 K15283 - gmx:100801832 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0328 08 3561907 3565635 Dod05g0289 05 3620339 3624862 ECH
Dod05g0289 05 3620339 3624862 Dod05g0289 05 3620339 3624862 ECH