Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0278 ATGAGTTGTTTTGCATGGTGTTCCTCACAGCAGAGGATTAACAAGAGGTCATTGAGCAAAAGCATCAAGGAATACCATGAAGCAAAAACATTATCCTCCTTTGCCAACATCTCTTTTACAACTGATAGTGGCAAGCGAAGGTTCTTAGCAGAAGAGCTAGCAAGGCTTGGAAAAGGAAACATTACCACCAAGGTTTTTTCTTTTAGAGATCTATGTGTTGCAACTCAGAACTTTCATCCTACGAATTTGATTGGTGAAGGAGGCTTTGGGAGAGTATACAAAGGACACCTTAAAAGCACAGATCAAGTTGTTGCTGTGAAGCAACTTGACAGAAATGGCTTTCAAGGGAATAGGGAATTTCTTGTTGAGGTTTTTATTTTGAGTCTTTTGCACCACCCTAACCTTGTCAACTTGGTAGGGTATTGTGCAGAAGGTGAACAGAGGATATTGGTGTATGAATACATGGTTAATGGTTCTCTAGAAGATCACTTACTTGATTTAACTCCCGATAAAAATCCTTTGGACTGGCAAACTAGAATGAAAATTGCAGAAGGTGCGGCACGAGGACTTGAATATTTACATGAAGTAGCGAAACCACCGGTGATATACCGTGATTTCAAAGCATCAAATATTCTGTTGGATGAGAACTTCAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTCGGTCCAACTGGAGATAGAACACACGTGTCAACAAGGGTGATGGGAACCTATGGCTATTGTGCACCTGAGTATGCATCCACCGGGCAGTTGACAACAAAATCAGATGTGTACAGCTTTGGAGTAGTGTTCTTGGAGATGATCACGGGAAGAAGAGTGATTGATAATTCAAGACCATCAGAGGAGCAAAATTTAGTCCTTTGGGCACAGCCACTTCTCAAAGACAGAAGGAAATTCACACAAATGGCTGATCCATTGCTGGAAGATAAATACCCCATAAAGGGTCTATACCAAGCTCTAGCAGTAGCAGCGATGTGTCTCCAAGAGGAAGCTGATACCCGGCCTTTGATCAGTGATGTAGTTACAGCTCTTGACTTCTTAGCAAAGAAGAAATTGGATGAAGAAACTCCTAGAAAAGAGACTTCTTCTCAGGATGAAGATTGTAGTGGACATAGACACATGGAATCTAATGAGTCTGATGAATCAGATGACGACGACGACGACGACGATGACGATGACAAGGATAGTGATGATGATACTAACAGAAAGGATAGTGAAAGGATGTGCTACTCCGAATGA 1263 0.4165 MSCFAWCSSQQRINKRSLSKSIKEYHEAKTLSSFANISFTTDSGKRRFLAEELARLGKGNITTKVFSFRDLCVATQNFHPTNLIGEGGFGRVYKGHLKSTDQVVAVKQLDRNGFQGNREFLVEVFILSLLHHPNLVNLVGYCAEGEQRILVYEYMVNGSLEDHLLDLTPDKNPLDWQTRMKIAEGAARGLEYLHEVAKPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDRTHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVFLEMITGRRVIDNSRPSEEQNLVLWAQPLLKDRRKFTQMADPLLEDKYPIKGLYQALAVAAMCLQEEADTRPLISDVVTALDFLAKKKLDEETPRKETSSQDEDCSGHRHMESNESDESDDDDDDDDDDDKDSDDDTNRKDSERMCYSE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0278 420 MobiDBLite consensus disorder prediction 362 386 - -
Dod05g0278 420 Gene3D Transferase(Phosphotransferase) domain 1 155 380 - -
Dod05g0278 420 SUPERFAMILY Protein kinase-like (PK-like) 64 366 IPR011009 -
Dod05g0278 420 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0278 420 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Dod05g0278 420 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 376 - -
Dod05g0278 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Dod05g0278 420 PANTHER OS07G0668900 PROTEIN 1 376 - -
Dod05g0278 420 CDD STKc_IRAK 84 353 - -
Dod05g0278 420 MobiDBLite consensus disorder prediction 362 420 - -
Dod05g0278 420 MobiDBLite consensus disorder prediction 387 405 - -
Dod05g0278 420 Gene3D Phosphorylase Kinase; domain 1 38 154 - -
Dod05g0278 420 Pfam Protein kinase domain 79 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0278 420 MobiDBLite consensus disorder prediction 406 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0278 Dod-Chr5 3529840 3532546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0278 60 389 Glycoside Hydrolase AT3G07070 66.372 1.48e-162 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod05g0278 Pkinase 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0278 - - gmx:100790474 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0278 05 3529840 3532546 Dod05g0278 05 3529840 3532546 ECH