Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0237 ATGGTTCCCACTGAGATGAGGGGAGTACACTATCTAGCACCTGAGAACCAAGTCCTAGTTCCACCAAACTTCACCTTGCTGCATAGTGACATCTCCAACATGCATCTAGATAGCCTCTTAAGCAACTTGCCAAACTGCTATTTCAATTCTGCAGGCCATGAATTTGTTCCTCCTCATCCTCCTCCTCCTACTTCATGCCTCAGCAGTAACAACTCAACTTCTGATGAAGCTGATGAGCATCAAGTCAGCATCATTGATGAGAGGAGGCAAAGGAGAATGATATCCAACAGAGAATCTGCAAGGAGATCAAGGATGAGGAAGCAGAAGCACTTGGATGAACTGTGGTCACAGGTTGTTAGGCTCAGGACTGAGAACCACAACCTTATTGACAAGCTGAACCATGCGTCTGAGTCTAATGAAAGGGTCCTCCAAGAGAATGCACGCCTCAAGGAAGAAGTTTCCGATCTTCGCCAAATGCTTGCAGACCTCCAAATTGGCACCCCTTTTGCCAGTAGCACCATGAGAGATTTTAATGAGGCTCCATGCAACACACCACAACTCAGACATGAATCCTCAACCCAGTCAATCACTTCTAGGACCTGCTATTAA 609 0.4631 MVPTEMRGVHYLAPENQVLVPPNFTLLHSDISNMHLDSLLSNLPNCYFNSAGHEFVPPHPPPPTSCLSSNNSTSDEADEHQVSIIDERRQRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHASESNERVLQENARLKEEVSDLRQMLADLQIGTPFASSTMRDFNEAPCNTPQLRHESSTQSITSRTCY* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0237 202 Coils Coil 132 166 - -
Dod05g0237 202 Pfam bZIP transcription factor 88 146 IPR004827 GO:0003700|GO:0006355
Dod05g0237 202 MobiDBLite consensus disorder prediction 180 202 - -
Dod05g0237 202 SUPERFAMILY Leucine zipper domain 88 138 IPR046347 GO:0003700|GO:0006355
Dod05g0237 202 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Dod05g0237 202 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 198 IPR044521 -
Dod05g0237 202 PANTHER BZIP PROTEIN (ATBZIP48) 1 198 - -
Dod05g0237 202 MobiDBLite consensus disorder prediction 59 80 - -
Dod05g0237 202 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Dod05g0237 202 CDD bZIP_plant_GBF1 89 137 IPR045314 GO:0003700|GO:0006355
Dod05g0237 202 Gene3D - 86 141 - -
Dod05g0237 202 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 149 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0237 Dod-Chr5 2949460 2950249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0237 53 170 bZIP Transcription Factor Family AT3G30530 65.000 1.50e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod05g0237 bZIP_1 6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0237 - - gmx:778126 288.5