Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0230 ATGTATGAAGATAGTGATCTCTTTGATCCCAATGCAATGATGGTACAAAGCACGTTGGCAGCAGCAGCAGCAACAAACCCAACATCAGACAACTGTTTCTCCCAAATGGGTAGTTCAGAGTCAGTTATGACTGCCACTGTCACCACACAGACACAAAACAACACCTTTTCAGAGAATGTGGGTCTCTCTGTGGAAACCTTGCCATACCCTTATCCTTGTGGTGAAAATCAAGCTTCTATAATTGCTGCCACTACCACCACCACCACTACAATGGAAGTTATTGGCCACTCACAACAAATGGAATTGGACATGGAAATTCCATACGACAACAATGGAAATGTATTCAACAATATCCATTTGGTGGAAGAGGCCAATTGTAATAATAGTAATAATAGTAGTAATAATAATAGCCATGCTTATTCAAGTTATGAACTTTCCTTTGATCAGTCCAATTGGGACACAACCAACGGTGTCCCAAGAATGCATCAATTTCCTTATCCAACACAAACACCAGATCTACTTAACCTCCTCCACATGCCAACAAGAAGTCCAAACTCTTCACTTGCTAACTCATCTATCTCCTTTGAAAACCCAGCAATACAAAATAACACCAACAACACAAGTCTTCATGGTAATAACTGGGTTGGTAATGGTAACTATCCTGTGGGAGCAGAAAGCACTAATGTGTCCACTGTTTCCTGTGACCCTTTGTTGCATTTGAACCTGCAAGCACCTTTGTTTCATCAGTCCTTACTCCATGGCTGCAACACCATGATGATGACACAACCACCAACACCAAGGAGTGATTTTGTGTTTGGCATAGGGGATGATTATGACAACATTGAGGGAAGTGGAGTTGTTGCCTATCTTGATGGAGATGATGGGAGAGATTTTGATAACAATGGGGTGCTAGAGTTCACACAAGATGTGGCTTATGTTGGTAAGAAGAGAGGAGGGAAAAGGACCAAGCAGTTCACCACTACCACTGAGAGACAAAGAAGAGTGGATTTGAGTAGCAAGTTTGATGCCTTGAGAGATCTCATCCCAAACCCCTCCAAGAATGATAGAGCATCTGTGGTGGGAGATGCTATTAACTACATTAGAGAGCTTCTAAGGACAGTGAATGAGCTCACATTATTGGTGGAGAAGAAAAGGTATGAGAAACAAAGGGTTAAAAGGTACAAGTTTAATGAAGAAGGGGATTTGTTGGAGGGATTCAATGATGATCTGAATAAGCAGCAGGTTGGGGACCAAGATGAGGAGCACTCTTACATTGAGAGCCTGAGGAGTTCTTGGATCCAGAGGAAATCCAAGGACACTGAGGTTGATGTGCGCATCATTGACAATGAGGTAACGATAAAGCTTGTTCAAAGGAAGAGGATCATCAATGCATGCTTAGTGCATGCTTCACAGGCCCTGCATGAACTCAATCTTGATCTTCAACATGTTGCTGGTGGCCACATTGGTGATTTCTACAGCTTTATGTTCAATTCCAAGATATGTGAAGGTTCATCAGTATATGCTAGTGCAATAGCCAACAAGCTTATTGAGGTGATGGACAGAAGTTTGGCAGCAGTGTGA 1581 0.4225 MYEDSDLFDPNAMMVQSTLAAAAATNPTSDNCFSQMGSSESVMTATVTTQTQNNTFSENVGLSVETLPYPYPCGENQASIIAATTTTTTTMEVIGHSQQMELDMEIPYDNNGNVFNNIHLVEEANCNNSNNSSNNNSHAYSSYELSFDQSNWDTTNGVPRMHQFPYPTQTPDLLNLLHMPTRSPNSSLANSSISFENPAIQNNTNNTSLHGNNWVGNGNYPVGAESTNVSTVSCDPLLHLNLQAPLFHQSLLHGCNTMMMTQPPTPRSDFVFGIGDDYDNIEGSGVVAYLDGDDGRDFDNNGVLEFTQDVAYVGKKRGGKRTKQFTTTTERQRRVDLSSKFDALRDLIPNPSKNDRASVVGDAINYIRELLRTVNELTLLVEKKRYEKQRVKRYKFNEEGDLLEGFNDDLNKQQVGDQDEEHSYIESLRSSWIQRKSKDTEVDVRIIDNEVTIKLVQRKRIINACLVHASQALHELNLDLQHVAGGHIGDFYSFMFNSKICEGSSVYASAIANKLIEVMDRSLAAV* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0230 526 PANTHER TRANSCRIPTION FACTOR BHLH91 2 525 IPR045895 GO:0006355|GO:0048658
Dod05g0230 526 PANTHER TRANSCRIPTION FACTOR BHLH91 2 525 - -
Dod05g0230 526 CDD bHLH_AtMYC1_like 328 385 IPR045896 -
Dod05g0230 526 Gene3D - 315 390 IPR036638 GO:0046983
Dod05g0230 526 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 370 IPR011598 GO:0046983
Dod05g0230 526 Pfam Helix-loop-helix DNA-binding domain 328 370 IPR011598 GO:0046983
Dod05g0230 526 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 320 390 IPR036638 GO:0046983
Dod05g0230 526 SMART finulus 327 376 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0230 Dod-Chr5 2870781 2872805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0230 79 521 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G06170 37.978 2.67e-66 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod05g0230 HLH 2.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0230 - - vra:106767981 397.512