Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0216 ATGGATTCTCTTCTCTCACTCCACACCCACACCCCCACCACCACCACCACCACAAACAACAATAACAACAACAACAACAACAACAACAACAACAACAACAACCCTTTCCCTCTCTCTCCTCCAGGCCTCACCCCCACCACCACCACATCAATACTAGTCCCCAAGCTCGAACCTCTCGATGACCTCTTCTTTCACCAAATCCAACAACACCACCAACCGCAACCTCAAATCCAACAAAACCACCACCCACACTCTCCCCCATTACTATTCCCTCCTTCCCCCGACAACAACAACAACAACAACAACAACAACAACAACACTGCTGATGGCGTGTCCGACCACGACGAAGAAGACCCCGACCTCTACGCCCACTTCTTCCGCGTCTCCGACCTCTTCCGCGTCGCCTTCGGCAGCACGCCACTCCAACAAAACGACGCCTTCTCCGACCAGAACGACAACAACCTCGCTGATTCCCTCACCTTGGCCCTCAATTCCCATCACCACATCATAGACGTCAACGCCACCGCCGTAACGCCGGACCCTAACTCCCGCGCAATCGTTCCCGTCCCCCCTCTGCCTCCGCCGGCCGCGGCTGAGGCTTTCACTCCCTCCTCCGCCGTGGCCGTCGCCAAGACCAAGCGCTGCAAGAAGAAGGAGCTCGTCAGAGTCTCCGATCTCACCGTCAAGGACCAGTTCCATTTCCGCGAAGTCGTTCGCCGCACCAGGATGATCTACGACTCCCTCCGCGTCCACGCCGCCATCGAGGAGGAGAAGCGCGTGGCGGAGGAGAGGCGCGTGGCGGCCGAGAGGCGCGTGAAGGAGGAGGAGAAGAAGAGAGCCGAATCCTCCCTCGCCGCTCTTGCCGCCGCCGTCGAATCCGCCGTATCCGTACCGCCGGTACCCGATCTGTCCCCCGCCGATCAGCAATCGACGATCAACAACAATGCAGGTGGCGGCGGAGTTGTCGCCGCCGCGCTCGCGGCGGCGACGCGGCGGGTCAGGATGCGCGGCGACCTGAAAGCGGCGGCGCTGATGAGAGAGCGCGGCTTGTGGCTGAACCGCGATAAGCGGATCGTCGGAGCAATCCCCGGTGTCTATGTCGGAGACTTGTTCCTCTTCAGGATGGAATTGTGCGTTCTTGGAATGCACCATCAGATCCAGGCTGGCATTGATTACCTGCCAGCTGGCATGTCCCCGAACGGCGAGCCAATCGCGACAAGCGTCATTGTCTCCGGCGGCTATGAGGACGATATGGACGACGGCGAGGTCATAACCTACACCGGACATGGTGGGCAGGCCACCAATTCCGTTAGGCAGGCCTCACACCAGAAGCTTGAAGGTGGGAACCTTGCATTGGAGAGGAGTATGCACCATGGGATTGAGGTTAGGGTCATCAGAGGGATGAGGTATGAAGGTAGTGCCTCAAAATCCGGTAAGGTTTATGTCTATGATGGTTTGTATAGGATTGTTGATTGCTGGTTTGATGTTGGTAAATCTGGTTTTGGTGTTTACAAGTATAAGCTTGTTAGGATTGAAGGTCAGGCTAAGATGGGTAGTGCTATACTTAAGGATGCTAGGGATGTTAGGAAACGTGGGGTGGACTACAAGCCTTTGTATTGTGTTTCGGTTGATGTGTCGAACAAGAAGGAGAAGGTTGCGGTTCGGCTTTTTAATGACATTGATGATAGTAAGGACCCTCTTTGTTTCGAGTATCTCGCGAGGACTAGCTTCCCGCCGTTTGTGTTTCATCAGAGTGGGACTGCTACCGGGTGTGATTGCATTGATGGTTGTGTTGATGGATGCTTTTGCTGTATGAAGAATGGGGGTGAGTTTCCTTATAATCAGCAGGGGATGCTTGTGAGAGGGAAGCCTTTGATTTTCGAGTGTGGGCCGTTCTGTCGTTGTCCTCCGAGTTGTAGGAATCGGGTAACGCAAAATGGGTTGAAGAACAGGTTGGAGGTGTTTAGGTCTAGGGAGACGGGTTGGGGAGTTAGGTCCTTGGACCTTATTCAGGCAGGTGCTTTTATCTGCGAGTATACGGGGGTTGTTTTGACTAGGGAGCAGGCGCAGATTTTGACGATGAATGGTGACTCTTTGATATATCCTAATCGGTTTTCTGGTAGGTGGGCAGAGTGGGGTGATTTATCTCAGGTATACTCAGATTATGAGCGTCCATCGTATCCGTCTATTCCTCCTTTAGATTTTTCTCTTGATGTGTCGAGAATGAGGAATGCTGCTTGCTATATGAGCCATAGTTCAAGTCCAAATGTGTTGGTTCAGTTTGTTCTGTATGATCACAACAACTTGATGTTCCCTCACATTATGCTGTTTGCAATGGAGAACATCCCTCCAATGAGAGAGGTCAGCATTGATTATGGGGTAGCTGATGAGTGGACAGGCAAGCTCTCTATATGTAATGGATGA 2424 0.5314 MDSLLSLHTHTPTTTTTTNNNNNNNNNNNNNNNNPFPLSPPGLTPTTTTSILVPKLEPLDDLFFHQIQQHHQPQPQIQQNHHPHSPPLLFPPSPDNNNNNNNNNNNTADGVSDHDEEDPDLYAHFFRVSDLFRVAFGSTPLQQNDAFSDQNDNNLADSLTLALNSHHHIIDVNATAVTPDPNSRAIVPVPPLPPPAAAEAFTPSSAVAVAKTKRCKKKELVRVSDLTVKDQFHFREVVRRTRMIYDSLRVHAAIEEEKRVAEERRVAAERRVKEEEKKRAESSLAALAAAVESAVSVPPVPDLSPADQQSTINNNAGGGGVVAAALAAATRRVRMRGDLKAAALMRERGLWLNRDKRIVGAIPGVYVGDLFLFRMELCVLGMHHQIQAGIDYLPAGMSPNGEPIATSVIVSGGYEDDMDDGEVITYTGHGGQATNSVRQASHQKLEGGNLALERSMHHGIEVRVIRGMRYEGSASKSGKVYVYDGLYRIVDCWFDVGKSGFGVYKYKLVRIEGQAKMGSAILKDARDVRKRGVDYKPLYCVSVDVSNKKEKVAVRLFNDIDDSKDPLCFEYLARTSFPPFVFHQSGTATGCDCIDGCVDGCFCCMKNGGEFPYNQQGMLVRGKPLIFECGPFCRCPPSCRNRVTQNGLKNRLEVFRSRETGWGVRSLDLIQAGAFICEYTGVVLTREQAQILTMNGDSLIYPNRFSGRWAEWGDLSQVYSDYERPSYPSIPPLDFSLDVSRMRNAACYMSHSSSPNVLVQFVLYDHNNLMFPHIMLFAMENIPPMREVSIDYGVADEWTGKLSICNG* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0216 807 MobiDBLite consensus disorder prediction 68 116 - -
Dod05g0216 807 MobiDBLite consensus disorder prediction 94 109 - -
Dod05g0216 807 SMART set_7 650 799 IPR001214 GO:0005515
Dod05g0216 807 SMART G9a_1 355 514 IPR003105 -
Dod05g0216 807 SUPERFAMILY PUA domain-like 341 523 IPR015947 -
Dod05g0216 807 Pfam Pre-SET motif 546 642 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod05g0216 807 SMART preset_2 542 634 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod05g0216 807 SUPERFAMILY SET domain 535 805 IPR046341 -
Dod05g0216 807 Coils Coil 251 290 - -
Dod05g0216 807 Pfam SET domain 661 793 IPR001214 GO:0005515
Dod05g0216 807 Pfam SAD/SRA domain 359 514 IPR003105 -
Dod05g0216 807 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 71 803 - -
Dod05g0216 807 MobiDBLite consensus disorder prediction 68 83 - -
Dod05g0216 807 Gene3D - 357 518 IPR036987 -
Dod05g0216 807 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 103 807 IPR025794 GO:0016571
Dod05g0216 807 ProSiteProfiles SET domain profile. 650 793 IPR001214 GO:0005515
Dod05g0216 807 Gene3D SET domain 519 806 IPR046341 -
Dod05g0216 807 MobiDBLite consensus disorder prediction 1 49 - -
Dod05g0216 807 ProSiteProfiles Pre-SET domain profile. 589 647 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod05g0216 807 ProSiteProfiles YDG domain profile. 360 510 IPR003105 -
Dod05g0216 807 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 71 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0216 Dod-Chr5 2771490 2773913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0216 340 795 Su(var)3-9 homologs AT1G73100 41.720 3.92e-103 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod05g0216 SAD_SRA 1.4e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0216 K11420 - aip:107626851 949.503