Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0214 ATGGGGCCAACGGTGGTGGCACAGCAAGGAAGGACCTGTGAGTCTCAGAGCAACCGTTTCACGGGAGTATGTTGGAGTTCCACTAACTGTGCCTCTGTTTGCGAAACTGAGGGCTTCTCTTCAGGGCATTGCCGTGGCTTCCGTCGCAAATGCTTCTGCAAGAAAACTTGTGATGCAATGACAGATCCAGGAATATTTGAAAATATAGGGCAAGGACTATAA 222 0.491 MGPTVVAQQGRTCESQSNRFTGVCWSSTNCASVCETEGFSSGHCRGFRRKCFCKKTCDAMTDPGIFENIGQGL* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0214 73 PANTHER DEFENSIN-LIKE PROTEIN 1 1 57 - -
Dod05g0214 73 PANTHER DEFENSIN-LIKE PROTEIN P322 1 57 - -
Dod05g0214 73 Pfam Gamma-thionin family 11 57 - -
Dod05g0214 73 SMART gth_4 12 57 IPR003614 GO:0006952
Dod05g0214 73 CDD Knot1 22 53 IPR003614 GO:0006952
Dod05g0214 73 PRINTS Purothionin signature 42 56 IPR008176 GO:0006952
Dod05g0214 73 PRINTS Purothionin signature 12 27 IPR008176 GO:0006952
Dod05g0214 73 Gene3D - 11 57 IPR036574 -
Dod05g0214 73 SUPERFAMILY Scorpion toxin-like 11 57 IPR036574 -
Dod05g0214 73 ProSitePatterns Gamma-thionins family signature. 11 34 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0214 Dod-Chr5 2719868 2720089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0214 1 57 Plant Defensins Gene Families AT2G02100 61.404 2.49e-20 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0214 - - gsj:114420878 93.5893