Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0213 GGCCAACAGTGGTGGCACAGCAAGGAAGGACTTGTGAATCTCAGAGCAACCGTTTCAAGGGAGTATGTTGGATTCCCATCAACTATGCCTCTATTTGCAAAACCGAGGGTTTCTCTTTAGGGCATTGTCATACCTTCCGTCGCAAATGCTTTTGCAAGAAAACTTGCGATGCAATGACGGATCCTAGAATTTTTGAAAATGGGTGGCAAGGACTATAA 218 0.4495 PTVVAQQGRTCESQSNRFKGVCWIPINYASICKTEGFSLGHCHTFRRKCFCKKTCDAMTDPRIFENGWQGL* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0213 71 PRINTS Purothionin signature 10 25 IPR008176 GO:0006952
Dod05g0213 71 PRINTS Purothionin signature 40 54 IPR008176 GO:0006952
Dod05g0213 71 SUPERFAMILY Scorpion toxin-like 9 55 IPR036574 -
Dod05g0213 71 CDD Knot1 32 51 IPR003614 GO:0006952
Dod05g0213 71 PANTHER DEFENSIN-LIKE PROTEIN 1 6 55 - -
Dod05g0213 71 PANTHER DEFENSIN-LIKE PROTEIN P322 6 55 - -
Dod05g0213 71 SMART gth_4 10 55 IPR003614 GO:0006952
Dod05g0213 71 Pfam Gamma-thionin family 9 55 - -
Dod05g0213 71 Gene3D - 9 55 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0213 Dod-Chr5 2701658 2701875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0213 4 55 Plant Defensins Gene Families AT2G02100 53.846 1.43e-14 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0213 - - zju:107429739 77.0257