Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0202 ATGAAGAAACTGGAATTATCTGCCAATTATGATCCCCATGGCAGCAGGGATCATCAGCCCGGTTTATCGCTGCCGGTAATCGGTCCCTCTAATTCTGCAAGCAGTAGGGAACCTGTCAACAAGTGGATGGCATTTTCTAGGGAGTCTGATTTCACCAATGATGTTAACCCTACAATGAAGAATCTTTCCGGGACTAAAAGTGTAGTGAAAGACAATGATTCAAGGAATCAGCTAAATGGGCCATCATCTTCGGATCATAGAATATTAACTGGAGCAAACATAGCTGAGAGAGCTGCTGAATGGGGTCTTGTAGTGAACTCAGGTAGTTTTAAAGCAATAGCAGAGAAAACAAGTTCCTCTTTTGATGGTGAACGAAGCAAAAACTCGGATCGATTTGTTGAATCGACAAGGACATCTGGCGAGTCAAATTATGGATCTGAGTCAGGGGCGTTCCCAAGGGTCTCACAAGAGTTGAAGGAAGCATTGGCGACGCTGCAACAGACATTTGTTGTCTCGGATGCAACCAAGCCAGACTGTCCAATTATGTATGCCAGCAGTGGCTTTTTTAGTATGACTGGTTACTCTTCAAAGGAGGTTATTGGAAGGAATTGTCGATTTCTTCAGGGGCCTGATACCGACGAGAAAGAAGTGGCGAAAATTCGGGATGCGACTAGAAATGGGAAAAGTTATTGTGGCAGGCTTTTAAACTACAAGAAAGATGGAACCCCATTCTGGAATCTTCTCACTATCACCCCCATCAAAGATGACCATGGCAATACTATCAAGTTCATTGGAATGCAGGTAGAGGTGAGCAAGTACACAGAAGGTGTGAGTGAAAAGGTGTTGCGACCAAATGGATTGCCTACATCATTAATTCGTTATGACGCTCGTCAGAAGGAAAAAGCTATGGGTTCCATCAGTGAGGTTGTACAAACTGTGAAGGCCCCAAAATCCATTAGTCAGGCTATGCATGATGAAACTGCCTCCAAGCATGAAGAGCAGGAGAAGTCAGATTTTGATTTTGTTTTGCCGAAATCTGCTGAAGTTGGGAGTACAAGTACACTTGGTAGACAAACTGCTCCGCAGAATTTTGAAAGTGATATGTCACGCCTGAGTTCTCATCAGGATAAGGGCAAGGCTTCAAGAAAATCAGGACGGATTTCTTTGAAGGGTTTTAAAGGAAGATCTATGAGTTCTGCAGGGAGAGATGAGGAGAAGCCAAATGTTGAACCAGAGGTTTTGATGACTAGGGAAATAAAGCGGACCGATAGTTGGGAGCGTTTGGAAAGAGAGAGGGATATAAGGCAGGGAATTGATCTAGCAACCACATTGGAGCGGATAGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGATAACCCAATTATATTTGCGTCTGATAGCTTTCTTGAACTTACTGAATATACGCGAGAAGAAATTCTGGGACGAAATTGTCGGTTTCTTCAAGGGCCAGAAACAGACCAAGCAACTGTTGCAAAGATTAGAGATGCTATCAGAGAACAAAGGGAAATCACTGTTCAGTTGATCAACTATACTAAGAGTGGAAAGAAGTTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGCGAACTTCAATACTTCATTGGTGTTCAGTTAGATGGAAGTGATCATGTCGAACCTTTGAAAAGTCGCTTGTCTGAGACAGCTGAGAAACAAAGTGCTAAGTTGGTAAAAGCCACTGCAGAAAATGTTGATGAAGCTGTCCGTGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTCAACCTGTCTTTCCACGACCTCACAAAAAGGACAATCCTTCTTGGATAGCAATACAAAAGATAGTTGCAAGGGACAAAAAAATTGGCTTGCATCATTTCTTGCCCATTAGGCCATTGGGTTGTGGAGATACTGGCAGTGTTCATTTGGTGGAACTCCAAGGTGCAGGCGAACTATATGCAATGAAGGCAATGGAAAAGTCGGTAATGCAAAATCGTAACAAGGTTCACCGAGCATGCATTGAGAGAGAGATTATATCACTACTAGATCATCCTTTTCTTCCAACACTATACACTTCATTTCAGACTTCTACCCATGTATGTTTGATTACTGACTTCTGCCCTGGGGGAGAGTTGTTTGCATTGCTTGACATGCAACCTATGAAGATTTTTAAAGAGGAATCAGCAAGATTCTATGCAGCAGAGGTTGTGATTGGTTTGGAATATCTCCACTGTTTAGGTATAATATACAGAGACTTAAAGCCTGAAAATATATTACTTAACAAGGATGGCCATGTTGTATTGACTGATTTTGATCTATCCTTTATGACAAATTGTAATCCCCAGGTTGTGAAGCCTCCACTACCAAGCAGTAGAAGAAGATCACGGAGTCAACCACCACCAACATTTGTTGCAGAGCCAGCTACACAATCAAATTCTTTTGTTGGAACAGAAGAATACATATCTCCGGAAATTATAACCGGAGCTGGGCATACTAGCGCTATTGATTGGTGGACCCTTGGTATCTTGTTGTATGAGATGCTCTACGGTCGTACCCCTTTCAGAGGAAAGAATAGACAGAAGACATTTTCTAACATCTTACACAAGGATCTTACCTTTCCGAGCAGCATCCCGGCAAGCCTTGCAGCCCGGCAGTTGATTAATGCACTATTGCAAAGAGACCCCGCCAATCGTCTAGGTTCAAGTACTGGTGCCAATGAAATCAAACAGCATCCATTTTTCCGTGGAATCAATTGGCCTTTAATCCGCAACATGAGTCCACCCCCATTGGATGTTCCTCTTCGATTGATAGCAAAAGATCCAATGGCCAAGGACATAAAGTGGGAAGATGATGGGGTGCTTGTTAGCTCAATTGATATGGATATTTTCTGA 2922 0.4264 MKKLELSANYDPHGSRDHQPGLSLPVIGPSNSASSREPVNKWMAFSRESDFTNDVNPTMKNLSGTKSVVKDNDSRNQLNGPSSSDHRILTGANIAERAAEWGLVVNSGSFKAIAEKTSSSFDGERSKNSDRFVESTRTSGESNYGSESGAFPRVSQELKEALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRNCRFLQGPDTDEKEVAKIRDATRNGKSYCGRLLNYKKDGTPFWNLLTITPIKDDHGNTIKFIGMQVEVSKYTEGVSEKVLRPNGLPTSLIRYDARQKEKAMGSISEVVQTVKAPKSISQAMHDETASKHEEQEKSDFDFVLPKSAEVGSTSTLGRQTAPQNFESDMSRLSSHQDKGKASRKSGRISLKGFKGRSMSSAGRDEEKPNVEPEVLMTREIKRTDSWERLERERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVAKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLKSRLSETAEKQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKDNPSWIAIQKIVARDKKIGLHHFLPIRPLGCGDTGSVHLVELQGAGELYAMKAMEKSVMQNRNKVHRACIEREIISLLDHPFLPTLYTSFQTSTHVCLITDFCPGGELFALLDMQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLNKDGHVVLTDFDLSFMTNCNPQVVKPPLPSSRRRSRSQPPPTFVAEPATQSNSFVGTEEYISPEIITGAGHTSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPANRLGSSTGANEIKQHPFFRGINWPLIRNMSPPPLDVPLRLIAKDPMAKDIKWEDDGVLVSSIDMDIF* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0202 973 Gene3D PAS domain 168 326 - -
Dod05g0202 973 ProSiteProfiles Protein kinase domain profile. 637 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0202 973 MobiDBLite consensus disorder prediction 1 37 - -
Dod05g0202 973 SMART serkin_6 637 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0202 973 MobiDBLite consensus disorder prediction 135 149 - -
Dod05g0202 973 CDD PAS 459 551 IPR000014 -
Dod05g0202 973 ProSiteProfiles PAC domain profile. 510 564 IPR000700 -
Dod05g0202 973 ProSiteProfiles PAS repeat profile. 436 509 IPR000014 -
Dod05g0202 973 MobiDBLite consensus disorder prediction 60 85 - -
Dod05g0202 973 SMART pas_2 156 225 IPR000014 -
Dod05g0202 973 SMART pas_2 438 507 IPR000014 -
Dod05g0202 973 PANTHER BNAA02G07840D PROTEIN 375 972 - -
Dod05g0202 973 PANTHER BNAA02G07840D PROTEIN 112 367 - -
Dod05g0202 973 Coils Coil 560 580 - -
Dod05g0202 973 MobiDBLite consensus disorder prediction 350 369 - -
Dod05g0202 973 SMART pac_2 513 555 IPR001610 -
Dod05g0202 973 SMART pac_2 231 273 IPR001610 -
Dod05g0202 973 SUPERFAMILY PYP-like sensor domain (PAS domain) 455 551 IPR035965 -
Dod05g0202 973 CDD STKc_phototropin_like 635 948 - -
Dod05g0202 973 MobiDBLite consensus disorder prediction 794 818 - -
Dod05g0202 973 ProSiteProfiles PAC domain profile. 228 282 IPR000700 -
Dod05g0202 973 SUPERFAMILY PYP-like sensor domain (PAS domain) 175 267 IPR035965 -
Dod05g0202 973 SUPERFAMILY Protein kinase-like (PK-like) 613 954 IPR011009 -
Dod05g0202 973 Pfam PAS domain 459 551 IPR000014 -
Dod05g0202 973 Pfam PAS domain 175 271 IPR000014 -
Dod05g0202 973 PANTHER FLIPPASE KINASE 1-RELATED 375 972 - -
Dod05g0202 973 PANTHER FLIPPASE KINASE 1-RELATED 112 367 - -
Dod05g0202 973 TIGRFAM sensory_box: PAS domain S-box protein 181 271 IPR000014 -
Dod05g0202 973 TIGRFAM sensory_box: PAS domain S-box protein 462 553 IPR000014 -
Dod05g0202 973 ProSiteProfiles PAS repeat profile. 154 227 IPR000014 -
Dod05g0202 973 MobiDBLite consensus disorder prediction 118 134 - -
Dod05g0202 973 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Dod05g0202 973 Pfam Protein kinase domain 640 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0202 973 Gene3D Transferase(Phosphotransferase) domain 1 721 938 - -
Dod05g0202 973 ProSitePatterns Protein kinases ATP-binding region signature. 643 666 IPR017441 GO:0005524
Dod05g0202 973 Gene3D Phosphorylase Kinase; domain 1 636 720 - -
Dod05g0202 973 CDD PAS 181 270 IPR000014 -
Dod05g0202 973 MobiDBLite consensus disorder prediction 117 149 - -
Dod05g0202 973 MobiDBLite consensus disorder prediction 350 408 - -
Dod05g0202 973 Gene3D PAS domain 425 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0202 Dod-Chr5 2537713 2561490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0202 80 972 AGC Kinase Gene Family AT5G58140 74.444 0.0 1323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod05g0202 Pkinase 7.8e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0202 K20715 - gmx:100820096 1572.37